Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g1018 ATGACAGAATCAAACGCAGTTGCAAATGGTTTGGCTGGTGCAGGTGGTGGAATCATTGCTCAAATCATAACTTATCCTCTTCAAACGGTAAACACGCGCCAGCAAACTGAGAGAACACTCAAGAGGAACAAGCAGAGTTTGCCATCCAATTCCAACTCAACCACTGCTCCTGGAACTCTTCTTCAGATCTTTCAGGTCATTGGAACTGAGGGTTGGGGTGGTCTCTATAGTGGCCTCAAGCCTTCTCTTCTTGGAACTGCTGCTTCTCAGGGCATTTACTACTATTTCTATCAAGTTTTTAAGAATAAGGCAGTGGCCATTGCAGCTGCGCGGAAAGTGAAAGGGCGTGGAGATGGTACTGTTGGAATGTTTGGTTGGCTTGTTGTGGCTGCAATTGCTGGGTCCTTGAATGTGTTGTTCACAAACCCAATATGGGTTTTGGTGACTCGGATGCAGACTCACACTCAAGCAGAAAGGAAAATCATGGATGAAAAGAAAGAAGCTTTAAGGAGGGCTGCTTCCGAAAGCACCATAGCAGACTCAACATTACAAGACAAATTGGCTGAATTGAATTCTATAAAACCCCGGCCATATGGAACTATACATGCAGCTAATGAAGTCTACAACGAAGCTGGTATAGTTGGATTTTGGAAGGGTGTCATCCCTGCCCTTATTATGGTATGCAATCCATCAATTCAGTTTATGATTTACGAGACCTCATTAAAGCATCTAAGGGCAAAACGTGCTGCTAAGAAGCAGGGGGATACAAGTATATCTGCTTTGGAGGTCTTTTTGGTGGGAGCAATAGCAAAACTTGGAGCTACTGTCTCAACATATCCATTACTAGTTGTCAAGTCAAGGCTTCAAGCAAAACAGGAGATTGGTGGAAGCAGTACTTTTGATGCGGTACTTAAAATGATCCGCTATGAAGGATTACCTGGCTTTTATAAGGGGATGAGCACAAAGATAGTACAAAGTGTTTTTGCAGCTTCTGTTCTATTCATGGTTAAGGAGGAGCTTGTTAAGGCTTTTATGGTGCTGGCAGATAAGAGCAAAAAAGTTGTATCAAATATAACTAGTTGA 1083 0.4284 MTESNAVANGLAGAGGGIIAQIITYPLQTVNTRQQTERTLKRNKQSLPSNSNSTTAPGTLLQIFQVIGTEGWGGLYSGLKPSLLGTAASQGIYYYFYQVFKNKAVAIAAARKVKGRGDGTVGMFGWLVVAAIAGSLNVLFTNPIWVLVTRMQTHTQAERKIMDEKKEALRRAASESTIADSTLQDKLAELNSIKPRPYGTIHAANEVYNEAGIVGFWKGVIPALIMVCNPSIQFMIYETSLKHLRAKRAAKKQGDTSISALEVFLVGAIAKLGATVSTYPLLVVKSRLQAKQEIGGSSTFDAVLKMIRYEGLPGFYKGMSTKIVQSVFAASVLFMVKEELVKAFMVLADKSKKVVSNITS 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g1018 360 ProSiteProfiles Solute carrier (Solcar) repeat profile. 258 343 IPR018108 -
Aed11g1018 360 PANTHER MITOCHONDRIAL NICOTINAMIDE ADENINE DINUCLEOTIDE TRANSPORTER 1-RELATED-RELATED 4 352 IPR044712 GO:0006862|GO:0055085
Aed11g1018 360 Pfam Mitochondrial carrier protein 4 102 IPR018108 -
Aed11g1018 360 Pfam Mitochondrial carrier protein 121 245 IPR018108 -
Aed11g1018 360 Pfam Mitochondrial carrier protein 258 345 IPR018108 -
Aed11g1018 360 ProSiteProfiles Solute carrier (Solcar) repeat profile. 121 243 IPR018108 -
Aed11g1018 360 Gene3D Mitochondrial carrier domain 11 356 IPR023395 -
Aed11g1018 360 PANTHER PEROXISOMAL NICOTINAMIDE ADENINE DINUCLEOTIDE CARRIER 4 352 - -
Aed11g1018 360 ProSiteProfiles Solute carrier (Solcar) repeat profile. 4 103 IPR018108 -
Aed11g1018 360 SUPERFAMILY Mitochondrial carrier 6 339 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g1018 Aed-Chr11 16009014 16014099 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed11g1018 26 344 Chloroplast and Mitochondria Gene Families AT1G25380 25.378 9.40e-25 101
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed11g1018 K13354 - gmx:100775304 622.854