Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g0996 ATGGGTAGTTGTGGAAGGGAAGGTGTAGTGAGACAGTATATAAGATCAAAGGTTCCTCGTTTAAGATGGACCCCTGAACTTCATCGTTGCTTTGTTTATGCCATTGAGACTCTTGGAGGCCATCACAAGGCTACTCCTAAGCTTGTTCTTCAATTGATGGATGTTAAAGGGCTCACAATTTCACACGTCAAGAGCCATCTGCAGGTTGATAAGACTTCTACCCAACATAGAAAACAATCTTTTCAGAAGCATCATGATGATGATGGATTTGTTGATGAAGTGAGTGATGTTGGCTTTCACTCTTGCTTGAAATCCATTAGAAAAGAATCTGATTCCCTCTCCAACTGCAGTAATTTCTCTTCAAAAAGGCAAAGAATATGTGAAGCAGTTCCAAATCCATACACTTCTACTTTTTATGATTACCTGCACAGCATGGGTGAGCAGAAGAGAAGAATAAAGAAGATTTGTGTTGGTTCAATATTATTGCAGACTCAACCCCTTTCCGCAACCTTTCCTATGCTACCAAACCATGAATCAGATTTTCTCCAGGTTGCCAAATTAAATGATAATAGGTTGCAGACTTTGAATGAAGAAGACATAGGAGGAGGTTGTGAGTTGTCATTGTCAATCTCATTGCCACAACCTCATCCTTCCTCTCAGATCAAAAGTAATGCTTCTTCTTCTTCAGTCAGTGAGACCAATACTGAGGCTTTTTCAATATTATGCCCTGAGTTTATTAACAACAGCAACAACTACATGAGCTGTTCTACTAGTTCTTCCAATGTCCCAAAAACAATTAACTTGGACCTTTCTTTGGCCATTTGA 825 0.3939 MGSCGREGVVRQYIRSKVPRLRWTPELHRCFVYAIETLGGHHKATPKLVLQLMDVKGLTISHVKSHLQVDKTSTQHRKQSFQKHHDDDGFVDEVSDVGFHSCLKSIRKESDSLSNCSNFSSKRQRICEAVPNPYTSTFYDYLHSMGEQKRRIKKICVGSILLQTQPLSATFPMLPNHESDFLQVAKLNDNRLQTLNEEDIGGGCELSLSISLPQPHPSSQIKSNASSSSVSETNTEAFSILCPEFINNSNNYMSCSTSSSNVPKTINLDLSLAI 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g0996 274 PANTHER MYB-LIKE DNA-BINDING DOMAIN, SHAQKYF CLASS PROTEIN 1 126 - -
Aed11g0996 274 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 19 69 IPR006447 GO:0003677
Aed11g0996 274 PANTHER MYB-LIKE DNA-BINDING DOMAIN, SHAQKYF CLASS PROTEIN 157 274 - -
Aed11g0996 274 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 1 126 IPR044848 GO:0003700
Aed11g0996 274 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 157 274 IPR044848 GO:0003700
Aed11g0996 274 SUPERFAMILY Homeodomain-like 17 69 IPR009057 -
Aed11g0996 274 Gene3D - 18 77 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g0996 Aed-Chr11 15817404 15820531 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed11g0996 1 73 G2-like Transcription Factor Family AT1G14600 69.231 1.91e-31 115
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Aed11g0996 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed11g0996 - - gmx:100810994 370.933