LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Aed11g0965	ATGGGGACACAAAAATCAAATATGTTTGATGCACCTTACAAATATTTGATGCCTGAAGATGCATATAACAATTCTGGGTCTGCTCCAACTCCCTTTTTAAATCAACAAGCAGCTGGTCCTTACATGCCTCTCTACATGTGGCAAAATCAGGCAAACAGCAGACTACTTCAATCTGATGCTTTGCATGATCCAAGGATGCTCTCCAGTAAACCCACAGTAGCTGGGGATGCTGTACTGGCTTTTTCAGAAATAGTACACAGGACTTTTGGCGAACAAAACATGAATTCAGTAAAAGAATGTGCTAGAGACTTACAACCTAAAATTTTAATGACTAAGGATTCAAGAGAAAATAGAAACAAATCTTCAATACTGAAAACCGACAAGGATGGAGTGTTGTGCAGTGAAGCATATGAAAACAAGGGATCAGATGAAGACCATGAGACTACTAATGATTTGGAGATGGGTCTAGATGCATCTGGCACTAGTGATCAACTTGTAAATTTGGAAAAGGATGAAATAAGAAGAGAAAGAAAAAGACAGTCAAACAGGGAATCAGCGAGGAGATCAAGGATGCGGAAAGAGAAAGAATGTGAAGATCTACATAAAAGAATGGAAATTCTTAAGGATGAAAACTCCATGCTCACACAGAGGCTCAAGAGTCTCTCTGAAGAGTGTCTGGAGATCTGCAATGAAAATGATGCCATAGAGGAAGAGCTGATTAAAACGTACGGACCAGAATCAATAGCAGATATACTGCTCTTTAAGCCTACCTGA	774	0.3941	MGTQKSNMFDAPYKYLMPEDAYNNSGSAPTPFLNQQAAGPYMPLYMWQNQANSRLLQSDALHDPRMLSSKPTVAGDAVLAFSEIVHRTFGEQNMNSVKECARDLQPKILMTKDSRENRNKSSILKTDKDGVLCSEAYENKGSDEDHETTNDLEMGLDASGTSDQLVNLEKDEIRRERKRQSNRESARRSRMRKEKECEDLHKRMEILKDENSMLTQRLKSLSEECLEICNENDAIEEELIKTYGPESIADILLFKPT	257

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Aed11g0965	257	Coils	Coil	183	238	-	-
	Aed11g0965	257	Gene3D	-	173	230	-	-
	Aed11g0965	257	PANTHER	BZIP TRANSCRIPTION FACTOR	151	257	-	-
	Aed11g0965	257	PANTHER	BZIP TRANSCRIPTION FACTOR	1	148	-	-
	Aed11g0965	257	SMART	brlzneu	170	234	IPR004827	GO:0003700\|GO:0006355
	Aed11g0965	257	MobiDBLite	consensus disorder prediction	138	195	-	-
	Aed11g0965	257	MobiDBLite	consensus disorder prediction	167	195	-	-
	Aed11g0965	257	PANTHER	G-BOX-BINDING FACTOR 3-RELATED	151	257	IPR044827	GO:0003700\|GO:0006355\|GO:0043565
	Aed11g0965	257	SUPERFAMILY	Leucine zipper domain	173	228	IPR046347	GO:0003700\|GO:0006355
	Aed11g0965	257	CDD	bZIP_plant_GBF1	175	225	IPR045314	GO:0003700\|GO:0006355
	Aed11g0965	257	Pfam	bZIP transcription factor	171	227	IPR004827	GO:0003700\|GO:0006355
	Aed11g0965	257	PANTHER	G-BOX-BINDING FACTOR 3-RELATED	1	148	IPR044827	GO:0003700\|GO:0006355\|GO:0043565
	Aed11g0965	257	MobiDBLite	consensus disorder prediction	138	152	-	-
	Aed11g0965	257	ProSitePatterns	Basic-leucine zipper (bZIP) domain signature.	177	192	IPR004827	GO:0003700\|GO:0006355
	Aed11g0965	257	ProSiteProfiles	Basic-leucine zipper (bZIP) domain profile.	172	224	IPR004827	GO:0003700\|GO:0006355

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Aed11g0965	Aed-Chr11	15406799	15411545	Dispersed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Aed11g0965	151	251	bZIP Transcription Factor Family	AT4G36730	40.594	9.29e-21	87.8

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	bZIP	Aed11g0965		bZIP_1	4.5e-15	CL0018

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Aed11g0965	K09060		-	gmx:102665715	413.69