LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Aed11g0946	ATGGCTCACCATTGTTCAAACCAGGCCTTAGGTTGCTACCTCTTGTTTGCTATTCTCGTGTCTTTCTTTTCAACCTTTTCTTATGCTCATAATTTTCATCGTGAATATGTCACTTATGAACAAAATGAAACAATAGCATCATCCCCAGAAAATACCTATGCTTATGCACCAACACCGGAAGTTGATGATGCTATTGCACCAACTCCAGATATTGATGAAGATGATACACAATTTGCTCCAGCACCAACTCCAGATATTGAAGATGAAGATGAGGCACAATTTGCTCCAGCACCAAGTTTCCAAGTTGAAAATGATGAACCACTTGTAAATGAAAGGCTAAAAAAGGCCTATGTTGCTCTTCAAGCATGGAAAAAGGCTATTTACTCTGACCCTTGGAACACAACTGATAACTGGGTTGGTGAAGATGTTTGCTCCTACAATGGTGTGTTTTGTGCTCCTGCCATTGATGATCCCACGTTGGATGTAGTAGCTGGTGTTGATCTTAACAATGCAGACATTGCTGGGCACCTCCCAGAAGAGTTAAGCAACTTGACAGATATTGCACTTTTCCACATTAACTCCAATAGGTTTTGTGGAATTGTCCCAGAGTCCTTGGAGAATCTCACACTTCTGCATGAGTTTGATATTAGCAACAATCGCTTTGTTGGTGGTTTTCCTTATGTGGCCCTCAAATGGACAAATTTGAAGTACTTTGATATTAGATTCAATGACTTTGAAGGATCTTTACCTCCAGAGCTATTTGAGAAGGATCTTGATGCAATATTTTTGAACAACAACCGTTTCACATCTTTCATCCCAGACACTCTAGGAAAATCCAATGCCTCAGTTGTGACCTTTGCTCACAACAAGTTCACAGGTTGCATTCCGAAGTCTATTGTGAACATGAAAAACATGAATGAGATTGTGTTCGTGGGCAATGAACTTGGAGGTTGCTTTCCACAAGATATTGGATTGATGGAAAGTGTGACTGTTTTGGACGCTAGCCATAATAAGTTTGTAGGGACTCTTCCTAACTTGTCAGGATTGAAGAATGTTGAGGTCATAGACATTTCACATAACAAATTTAGTGGATATGTGTCTAACAATGTTTGCCAGCTTCCTATGTTGACAAACTTCACATTCTCTAACAACTACTTCAATGGAGAAGCTCAAGCTTGTGTGTCTTCTTCCAATTCGTTGGTGGCTTTGGATGACTCAAAAAATTGTTTATCAGGAAGGAAGAATCAAAAGTCATCCAAACAGTGCTTGCAAGTGCTAACTCGCCCTGTGGATTGTACCAAACACTGTGATGGAGGCAAAGGTCATGACAATGGGAATAGCCATAGCCATAGCCATGTCTCCTCAACACCAAAGGCTAAGCCACCCCCAACACCAAAGGTTGTACACTCACCATCACCTCCAGTTAACTCTCCACCACCCTATGTGTCCTCCCCACCACCACAAGTTAACTCTCCACCACCCCTTGTGTCCTCACCACCACTACCACCCATCAACTCTCCACCACCCTCTGTGTTCTCCCCACCACCACAAGTTAACTCTCCACCATCTCCTGTGTCCTCACCACCTCCACCAGTTCACTCTCCACCACCCCCAGTATCCTCACCACCACCACCACCACCCATCAACTCTCCACCACCTCTTGTGTCCTCCCCACCACCATTAGTTAACTATCCACCACCCCTAGTGTCCTCACCAACACCACCCATCAACTCTCCACCACCTCCTGTATCCTCCCCACCACCATCAGTTCACTCTCCACCACCCCTTGTGTCCTCACCACCACCACCAGTTAACTCTCCACCACCCCGTGTGTCCTCACCACCACCACCACCACCTCTTGTGTCCTTCCCACTACCACCAGTTAACTCTCCACCACCCCCTGTATCCTCACCACCACCTCCAGTTAACTCTCCCCCACCTCCTATGTCCTCCCCACCACCACAAGTTAACTCTCCACCACCCCCAGTGTCCTCACCACCTCCACCAGTTCACTCTCCACCACCCCCTGTGTTCTCACCACCACCACCACCCATCAACTCTCCACCACCTCCTGTGTCCTCCCCACCACCACCAGTTTACTCTCCACCACCCCTAGTGTCCTCACCACCTCCACCAGTTCACTCTCCACCACCTCCTGTGTCCTCCCCACCACCCCCAGTGTCCCCACCACCTCCACCAGTTCACTCTCCACCACCCCCTCTATCCTCCCCACCACCTCCATTTAACTCCCCACCTCCACCAGTGTCCTCACCACCACCACCACCACCAATCAACTCTCCACCACCATCACCAATCAACTCACCACCTCCTTCAATTAATTCCCCACCACCACCACCACCACCACCACCAGTTCAATCACCACCTCCTCCAATTAATTCCCCACCACAACCAGTCTCTTCTCCACCACCAACATGGGATGATGTTGTCCTCCCACCACACTTCGGAGCTTCATACCGATCACCTCCACCACCAACAATTGATGGATACTAA	2511	0.4767	MAHHCSNQALGCYLLFAILVSFFSTFSYAHNFHREYVTYEQNETIASSPENTYAYAPTPEVDDAIAPTPDIDEDDTQFAPAPTPDIEDEDEAQFAPAPSFQVENDEPLVNERLKKAYVALQAWKKAIYSDPWNTTDNWVGEDVCSYNGVFCAPAIDDPTLDVVAGVDLNNADIAGHLPEELSNLTDIALFHINSNRFCGIVPESLENLTLLHEFDISNNRFVGGFPYVALKWTNLKYFDIRFNDFEGSLPPELFEKDLDAIFLNNNRFTSFIPDTLGKSNASVVTFAHNKFTGCIPKSIVNMKNMNEIVFVGNELGGCFPQDIGLMESVTVLDASHNKFVGTLPNLSGLKNVEVIDISHNKFSGYVSNNVCQLPMLTNFTFSNNYFNGEAQACVSSSNSLVALDDSKNCLSGRKNQKSSKQCLQVLTRPVDCTKHCDGGKGHDNGNSHSHSHVSSTPKAKPPPTPKVVHSPSPPVNSPPPYVSSPPPQVNSPPPLVSSPPLPPINSPPPSVFSPPPQVNSPPSPVSSPPPPVHSPPPPVSSPPPPPPINSPPPLVSSPPPLVNYPPPLVSSPTPPINSPPPPVSSPPPSVHSPPPLVSSPPPPVNSPPPRVSSPPPPPPLVSFPLPPVNSPPPPVSSPPPPVNSPPPPMSSPPPQVNSPPPPVSSPPPPVHSPPPPVFSPPPPPINSPPPPVSSPPPPVYSPPPLVSSPPPPVHSPPPPVSSPPPPVSPPPPPVHSPPPPLSSPPPPFNSPPPPVSSPPPPPPINSPPPSPINSPPPSINSPPPPPPPPPVQSPPPPINSPPQPVSSPPPTWDDVVLPPHFGASYRSPPPPTIDGY	836

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Aed11g0946	836	MobiDBLite	consensus disorder prediction	60	81	-	-
	Aed11g0946	836	MobiDBLite	consensus disorder prediction	442	836	-	-
	Aed11g0946	836	PANTHER	LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED	566	657	-	-
	Aed11g0946	836	MobiDBLite	consensus disorder prediction	458	815	-	-
	Aed11g0946	836	PRINTS	Proline rich extensin signature	510	531	-	-
	Aed11g0946	836	PRINTS	Proline rich extensin signature	531	547	-	-
	Aed11g0946	836	PRINTS	Proline rich extensin signature	491	503	-	-
	Aed11g0946	836	PRINTS	Proline rich extensin signature	451	463	-	-
	Aed11g0946	836	PRINTS	Proline rich extensin signature	471	487	-	-
	Aed11g0946	836	PANTHER	LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED	645	728	-	-
	Aed11g0946	836	PANTHER	LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED	104	444	-	-
	Aed11g0946	836	PANTHER	LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED	453	577	-	-
	Aed11g0946	836	Gene3D	Ribonuclease Inhibitor	114	282	IPR032675	-
	Aed11g0946	836	PANTHER	POLLEN-SPECIFIC LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 1	453	577	-	-
	Aed11g0946	836	SUPERFAMILY	L domain-like	118	412	-	-
	Aed11g0946	836	Gene3D	Ribonuclease Inhibitor	283	429	IPR032675	-
	Aed11g0946	836	PANTHER	POLLEN-SPECIFIC LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 1	645	728	-	-
	Aed11g0946	836	PANTHER	POLLEN-SPECIFIC LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 1	566	657	-	-
	Aed11g0946	836	PANTHER	POLLEN-SPECIFIC LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 1	104	444	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Aed11g0946	Aed-Chr11	15178605	15181115	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Aed11g0946	1	434	Trihelix Transcription Factor Family	AT3G19020	56.193	2.11e-170	515

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Aed11g0946	-		-	gsj:114419228	692.575