Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g0933 ATGATGATGATGGGTTTGGTTGTTCCTGAAGAAGAAGAAGAAGAACTAAGCTTAGATTTGAGACCCTCTTTTGTTCCCAAAACCATCACTGATTTTCTCTGCCACCTTTCAACCACAACCCCAAATGCATCCCTCAACAGTTTGGAACTCGAATTGGCCAAGATCCATGCATTCAAACGCGAACTTCCTCTCTGCATGTTCCTCTTAAATGATGGTTCGTTTCAAAGGGCTAACGCACTCTTTGTGGTTGCAGCAATTTCAGCTTTGAAGGCGGAATCAGCAAAATGCAGGGCTTACAAGTCTGAGCCAGTGTTGGAGGAGTTCATTCCTCTGAAGAAAGAGTGTGATGAGAGGGAGGAAAGTGAGAAGGAGAAGGAATGCAGGGACAAGAAGAATTGGATGAGTTCTTTTCAGCTTTGGAACACTGATAATAATGCATATGAATGTGACAAAAAACAGAACTATAAAGTTGAAAACAAGAATAATGGAGAGGAAACAAAATCTGTGGCCAAGGACTTCTTCCAGTATGGTAGAATTAGAAATGGAGAGAGGGGTTTTGTTATGCCTTTTTCCACTTACCCTGCAACAAAAGAAGAAAAGGAGGATTGTGTTGTGAATGGACTTTCTCTTCAGACACCAGGAACTGCAGCAGTGAAAAGCACAAGTTCTTGCAGGGTGGTTTCCTCCACTCCTTCACTGCCGCAAAGTGGTGGCCGGAAACAAAGGCGGTGCTGGTCGCCGGAGTTGCATAAACGGTTTGTTAAGGCTTTAGAGGAGCTTGGAGGTTCTCAAGCAGCTACTCCAAAGCAAATTAGGGAACTCATGAAGGTAGATGGCCTGACCAATGATGAAAAATACCGACTTCATACACGGCGAGTTCCGATTGCTACAGCTGCAACTTCTAATCGGTCTGCTGTAGATCTTGGAGGCTTGTGGATGCACAATGAATCATTGAAGGGTAGCAGCTCTGGTTCTCCTCAGGGCCCTCTCCAATTAGCTACACAATCTGATGATGATGATGATGATATAAAAGTAGAGGAGTTTCACAGCTACTCAAGAACAAACAACATGAGTTTTGATATGATAATCTAA 1092 0.435 MMMMGLVVPEEEEEELSLDLRPSFVPKTITDFLCHLSTTTPNASLNSLELELAKIHAFKRELPLCMFLLNDGSFQRANALFVVAAISALKAESAKCRAYKSEPVLEEFIPLKKECDEREESEKEKECRDKKNWMSSFQLWNTDNNAYECDKKQNYKVENKNNGEETKSVAKDFFQYGRIRNGERGFVMPFSTYPATKEEKEDCVVNGLSLQTPGTAAVKSTSSCRVVSSTPSLPQSGGRKQRRCWSPELHKRFVKALEELGGSQAATPKQIRELMKVDGLTNDEKYRLHTRRVPIATAATSNRSAVDLGGLWMHNESLKGSSSGSPQGPLQLATQSDDDDDDIKVEEFHSYSRTNNMSFDMII 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g0933 363 MobiDBLite consensus disorder prediction 317 334 - -
Aed11g0933 363 Gene3D - 239 292 - -
Aed11g0933 363 PANTHER TRANSCRIPTION FACTOR HHO6 15 338 - -
Aed11g0933 363 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 15 338 IPR044787 GO:0003700|GO:0006355
Aed11g0933 363 SUPERFAMILY Homeodomain-like 239 291 IPR009057 -
Aed11g0933 363 MobiDBLite consensus disorder prediction 317 342 - -
Aed11g0933 363 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 240 284 IPR006447 GO:0003677
Aed11g0933 363 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 239 296 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g0933 Aed-Chr11 14985625 14987791 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed11g0933 15 313 G2-like Transcription Factor Family AT2G03500 38.369 2.58e-43 154
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Aed11g0933 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed11g0933 - - gmx:100809323 477.633