Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g0901 ATGTTGCCACCACCGGGAACCATCGTATTCAACACCGTCGGAAGGGTCCAATACGGTTTCGACGTGTTTTCCGTCGACCTCAACCACCACCATCCTCCTCCTCACGCCGCCGCAGACAAGCGCCTCACCGACGGTGTTTCCGTTAACCACAACGCACAGTTCATTAACCAACAAAACGATGTCGTCTTCGTCTCTGAACGGACCGGGGCGCCCCGCTTCTACATTACCCGACCCGAAACTGAACCCCAGCCTTTGCCCTTTCTCCCCAACGCTCTCTTCAACGATCGCCCAATCATCAAAAACAGAAACCTTTACTTCGTTTCCACGCACGAACAAAACGATGCCGTTTTCACTAGCTGGAGCGCCGTTTACTCCACCGCCGTCGACGAGGCCGCAACTACTACAGTCAAGAGACTCACCCCGCGCGGCGAGGTGGACTACAGCCCCGCCGTATCCCTCACCGGAAAATTCCTCGCCGTCGCCTCCTACCGCTCTCGCCGCTGGCAAACCGACGATTTCCGCGAACTCCAAACGGAGATCGTCGTCTTCCCCGAGTCCGACACGGATAACCGAGTCACGGTGAGCGAACGCGGTGGCTGGCCAACGTGGTCACAAGATTCAACGATTTTCTTCCACAGAATCGCCAAAGATGGATGGTGGAGCATCTTCCGCGTCGATTTCACCGATTCCGTTCTATCAGAATCGCAAAACTCGTTACGCTCGCCTATTCGCGTTACACCGCCGGGGCTGCACTGTTTCACTCCGGCAGCTTTCCACGACGGAAAGCGCATCTCCGTCGCAACTCGCCGGAGAGAGAGCACTTTCCGGCACATCGAGATCTTCGATCTCGAATCGCAAACGTTCCAACGAATCACTGAAGAAATAAATCCTAACTTTCACCACTACAACCCGTTCGTCTCGTTGGACTCTCGCCACGTCGGGTACCACCGATTCCGAGGCGAGTCGACTCAGGGCGAGTCAACACACCCTCACCTCGATAAAGTCCTCTCTCCGGTTCGCGATTTACAGTTACTCAGACTTAACGGTTCGTTTCCCAGCTTCTCCCCGGACGGGGATTTCATCGCTTTCAACCACGACTTCGACGCCAAGACTAGCGGTGGGGTTAAGATCATTAAATCAAACGGTTCTAAACGCTGGACGTTGCTCAAAGGACGAACATGCTTCCACAACGCGTGGAGCCCAACGGAGAAGAACGTGATATACACCTCCGTCGGTCCAATCTTCGAGTCGGTTTCGAAGACGGTTCAAATCGCGCGCATCGAGTTCGACCCGGTTCATTTAACCAACGAACGTGAAGAGGTTCCGTTTAAGCTAGCGATTCTAACCAACGAGAAAACGGGGAACAACGCTTTTCCGTCATGCTCCCCTGACGGGAAGAGTATCGTGTTTCGGTCTGGGAGGTCGGGGCAAAAGAATTTGTACATAGTTGACGCCATTAATGGAGAGTTTAACGGCGGGTTACGGAGGTTGACGGAGGGAGAGTGGATCGATACGATGCCGTGTTGGTCTCCGAAAGGGGATTTGATAGCGTTTTCGTCGAACAGGCATGACCCCGGAAACAGTGAGGTGTTTGGGATTTATCTGGTGGGGCCAGATGGGAGTGGATTAAGGAGAGTTGACGTGGCGAAGGGAGTGGAAGAAGCTGCGAGGGAGAGATTGAACCACGTGTGTTTTAGCCGCGACGGAGAGTGGTTGCTTTTCACGGCGAACTTGGGTGGCGTGAGTGCGGACCCGGTGGGGCTGCCGAACCAGTTTCAGCCTTATGGGGATTTGTATGTGGTGAGGTTGGATGGGAGTGGGTTGAGGAGGTTGACATGTAATGCGTATGAGAACGGAACGCCTACGTGGCACCATGGGGGTCTGGCGTTATCTGCTGGTGAAGATGGTGAAGGTGAGAATAAGAAGAATAATGAGGGTGGTGAAGGAAGAAACAGAAGGGTGCTTAATGATATTGGGAATCTTTTGCACAATCAAGCCCATGGAATTAACGTGTCTAAACCTATCACAAGGAAATTTCCTGCTCAATTATTTCCCAACGCACATGCTGCAGAAGAGAAGAACAAGAAATCAAGCACTGAAGTGGGGAATGACATGGTGGTGATAGCAACTGATTGGAATTTTGTTGCTGCAACAAAGGTGGAAGCAGCTAAGAAGGTTAAGGAAGAACCTGAAGTGATTCTCATTAGCTCCGACGACGAATCAGAAGAAGAGAAGGAGAAACAAGATGTTAAGGGTAATAATAAGGCAAGGGAAAAGTCTGCCAGAAAAAATCCAAAGGCATTCAGTTCAGTCCTCTCTGCTCGAAGCAAGGGTGCTTGTGGAATCCCAAAGGATTTGATAGTGAACATTGATGAAGGCTACATGGACAATGAATTGGCGGCAGCCGAGTACATCGATGATATCTATAAATTTTACAAGACCGAAGCTGTGTCAAGAAGCCAACTTCAGCCGGTTGGCATCAGCTCAATGCTGATAGCCTCAAAATATGAAGAGAGATGGCCACCGCAGGTTAATGACTTTGTGTGCTTATCAGACAATGCTTATGTTAGTGAACAAGTGATGATGATGGAGAAAACAATTCTTAGGAAGCTTGAATGGAACTTAACAGTTCCAACACCTTATGTCTTCTTGCCTTCTCTGATTGCTGCTTCTGCTGTGTTTGCGGCTCGATGCACCCTTGGAAGGAGCCCTTTCTGGACAAGCACTTTGAAGCACTACACAGGCTACACTGAGGAGCAACTAAGCAATTGTGCCAAAATCATGGTCAACCTTCATGCTCATGCTCCAGGAAGTAAGCTTAGGGCAGTTTACAAGAAATTCTGCAACTTAGATCTTTGTGCTGTTGCTCTTCTTTCTCCAGCGAAGAACTTACTGTCTTGTGGGAAAAACCTAAACTAG 2919 0.5043 MLPPPGTIVFNTVGRVQYGFDVFSVDLNHHHPPPHAAADKRLTDGVSVNHNAQFINQQNDVVFVSERTGAPRFYITRPETEPQPLPFLPNALFNDRPIIKNRNLYFVSTHEQNDAVFTSWSAVYSTAVDEAATTTVKRLTPRGEVDYSPAVSLTGKFLAVASYRSRRWQTDDFRELQTEIVVFPESDTDNRVTVSERGGWPTWSQDSTIFFHRIAKDGWWSIFRVDFTDSVLSESQNSLRSPIRVTPPGLHCFTPAAFHDGKRISVATRRRESTFRHIEIFDLESQTFQRITEEINPNFHHYNPFVSLDSRHVGYHRFRGESTQGESTHPHLDKVLSPVRDLQLLRLNGSFPSFSPDGDFIAFNHDFDAKTSGGVKIIKSNGSKRWTLLKGRTCFHNAWSPTEKNVIYTSVGPIFESVSKTVQIARIEFDPVHLTNEREEVPFKLAILTNEKTGNNAFPSCSPDGKSIVFRSGRSGQKNLYIVDAINGEFNGGLRRLTEGEWIDTMPCWSPKGDLIAFSSNRHDPGNSEVFGIYLVGPDGSGLRRVDVAKGVEEAARERLNHVCFSRDGEWLLFTANLGGVSADPVGLPNQFQPYGDLYVVRLDGSGLRRLTCNAYENGTPTWHHGGLALSAGEDGEGENKKNNEGGEGRNRRVLNDIGNLLHNQAHGINVSKPITRKFPAQLFPNAHAAEEKNKKSSTEVGNDMVVIATDWNFVAATKVEAAKKVKEEPEVILISSDDESEEEKEKQDVKGNNKAREKSARKNPKAFSSVLSARSKGACGIPKDLIVNIDEGYMDNELAAAEYIDDIYKFYKTEAVSRSQLQPVGISSMLIASKYEERWPPQVNDFVCLSDNAYVSEQVMMMEKTILRKLEWNLTVPTPYVFLPSLIAASAVFAARCTLGRSPFWTSTLKHYTGYTEEQLSNCAKIMVNLHAHAPGSKLRAVYKKFCNLDLCAVALLSPAKNLLSCGKNLN 972
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g0901 972 MobiDBLite consensus disorder prediction 635 651 - -
Aed11g0901 972 SUPERFAMILY Cyclin-like 810 875 IPR036915 -
Aed11g0901 972 SUPERFAMILY Cyclin-like 875 963 IPR036915 -
Aed11g0901 972 PANTHER TOLB PROTEIN-LIKE PROTEIN 4 628 - -
Aed11g0901 972 SMART Cyclin_C_2 842 961 IPR004367 -
Aed11g0901 972 MobiDBLite consensus disorder prediction 626 651 - -
Aed11g0901 972 MobiDBLite consensus disorder prediction 736 769 - -
Aed11g0901 972 MobiDBLite consensus disorder prediction 736 764 - -
Aed11g0901 972 Gene3D - 803 876 - -
Aed11g0901 972 SMART cyclin_7 845 930 IPR013763 -
Aed11g0901 972 Pfam WD40-like Beta Propeller Repeat 453 482 IPR011659 -
Aed11g0901 972 Pfam WD40-like Beta Propeller Repeat 494 534 IPR011659 -
Aed11g0901 972 Pfam Cyclin, N-terminal domain 810 876 IPR006671 -
Aed11g0901 972 Gene3D - 334 553 IPR011042 -
Aed11g0901 972 CDD CYCLIN 801 868 IPR013763 -
Aed11g0901 972 Pfam Cyclin, C-terminal domain 883 959 IPR004367 -
Aed11g0901 972 Gene3D - 885 966 - -
Aed11g0901 972 SUPERFAMILY DPP6 N-terminal domain-like 249 636 - -
Aed11g0901 972 SUPERFAMILY Tricorn protease N-terminal domain 40 296 - -
Aed11g0901 972 CDD CYCLIN 883 929 IPR013763 -
Aed11g0901 972 PANTHER DPP6 N-TERMINAL DOMAIN-LIKE PROTEIN 4 628 - -
Aed11g0901 972 Gene3D - 100 333 IPR011042 -
Aed11g0901 972 Gene3D - 554 665 IPR011042 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g0901 Aed-Chr11 14462550 14469564 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed11g0901 647 966 Core Cell Cycle Gene Families AT4G37490 31.368 1.50e-46 171
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed11g0901 - - gmx:100814036 1158.28