Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g0888 ATGTCTCAGCTCCAAAAGAATGAGAATCAAGTTGGTAGAATTGGGAGAAAGAAACTTGTTCGATGGACTAAAGAGGAACACGGATTATTTCTTCATGGGATGTCTATATTTGGAAAAGGACATTGGTCAAAGATTGCACGGTATGTTGTGATCACAAAAACTCAGCACCAAGTTGCAAGCCACGCCCAAAAGTATTTCCTTCACCATAGCAGTGTCAAACAGAGCAAAAAACAGAGGAAAAGAAGACCAAGCATACATGACATAACCTTGGAGAATGAATTGGTCTCACAACAAATTCACAAAGCAAAGAATGACAACTTGGTCTCACACTCCATAGATCATCAACACAACCCAATTGAGCAATTGCCAGAGAATCTGAATCCACAGCAATTGTTGACACCCTTTGAAGGTAACTTGGCAGCACTTCACCACAATGAACAACAGAGTTCATGGCTTCTTCCCTCAACAATGCAGCAACAGTTACCTCACAGTCACAGCAATGACAGCATTGATTTGGCTCCTCTTCCTGATCTAATAGACTTATCTCCTCTCCCTAATCTACCAGACTTACCTGATCTCTATACTCAGCAATTTCCCGGCTTCATTGACCATCATAGCTTGGTTCCAACTCCAAATCAGCAGTTTCCTAACTACTTTGACCAACCGATGTTACAAGAGCTACAAGGGTTAAGCCTACTAGATTATATATTACCCTATGAATTGAAGTTCGGCCCTAAGGATTTATCAGGAGGCAAAGTTGTGACAATAGTGTTAGTGCCACCTCAAACTCCTCCAACTATCTCCTTCTTACTCACTTCAGATGGTGCTGTGTTGGAGAAACTACAACCTTACATAGAGAGTGGGAAAGTGAAGGCAGTGTTGGATCCTAAGAGTCCTTTTCCATTTTCTCATACTGTGGAGGCATTTTCATACATGAAGACTAATAGGGCAACTGGAAAACAAGTCATACATCCCATCCCATAG 984 0.4157 MSQLQKNENQVGRIGRKKLVRWTKEEHGLFLHGMSIFGKGHWSKIARYVVITKTQHQVASHAQKYFLHHSSVKQSKKQRKRRPSIHDITLENELVSQQIHKAKNDNLVSHSIDHQHNPIEQLPENLNPQQLLTPFEGNLAALHHNEQQSSWLLPSTMQQQLPHSHSNDSIDLAPLPDLIDLSPLPNLPDLPDLYTQQFPGFIDHHSLVPTPNQQFPNYFDQPMLQELQGLSLLDYILPYELKFGPKDLSGGKVVTIVLVPPQTPPTISFLLTSDGAVLEKLQPYIESGKVKAVLDPKSPFPFSHTVEAFSYMKTNRATGKQVIHPIP 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g0888 327 Pfam Zinc-binding dehydrogenase 266 323 - -
Aed11g0888 327 SUPERFAMILY Homeodomain-like 16 71 IPR009057 -
Aed11g0888 327 ProSiteProfiles Myb-like domain profile. 21 66 IPR001005 -
Aed11g0888 327 Gene3D - 20 72 - -
Aed11g0888 327 Gene3D - 275 323 - -
Aed11g0888 327 SMART sant 18 68 IPR001005 -
Aed11g0888 327 Pfam Myb-like DNA-binding domain 21 66 IPR001005 -
Aed11g0888 327 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 16 70 IPR017930 -
Aed11g0888 327 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 17 68 IPR006447 GO:0003677
Aed11g0888 327 Gene3D - 249 274 - -
Aed11g0888 327 CDD SANT 21 66 IPR001005 -
Aed11g0888 327 PANTHER TRANSCRIPTION FACTOR KUA1 12 154 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g0888 Aed-Chr11 14209047 14219479 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Aed11g0888 ADH_zinc_N_2 9.5e-08 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed11g0888 K18980 - gmx:102668837 127.872