Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g0871 ATGGGTCACCCACCGGATCAATGTGAACAAAACCAACACGCCTCCATTATAAATCATATCTTCGGTTTTTCTGTACGGCAACTCCGCTCCATTCCGAAACGAACCGAACCAAACCCCTTTGCTTTTGTTTCATTTCATGGGCTCATACTGGGACCACACAGCGCCATGACCAAACCCAACCACACTTTCTTTCACAATCTCATCAAGCCCTTCAAATTCAGCTCCAGTAATGAAGAGGGACAAAGCGAAGAAGAGGAAATACAGAACTTAGCTGTACAGGAGCAGAAAATCTTCCCCTACGAAACATTGGTTGCTGCAACCAACAAATTTCACATTCTTAACAAGCTAGGTGAAGGTGGATTTGGACCCGTCTTTAAGGGGAAATTGAGTGATGGGAGAGAGATAGCGGTGAAGAAGTTATCGCATAGATCGAGTCAGGGGAAGACGCAGTTCATAAATGAGGCGAAGTTGTTGGCGCGTGTGCAGCACCGCAATGTGGTGACTTTGTTCGGATATTGTACCCATGGCGCCGCCGAGAAGCTTCTTGTTTACGAATATGCATACAGGCTATACAAGAAGGGAAGGGCCCTAGAAATGATGGACCCAACACTGGCCTCTTCAGTGGCAACAGAGCAAGTAGAAATGTGTATTCAACTGGGTCTTCTCTGCACTCAAAGCGATCCGCAGCTGCGTCCAACCATGGGGCGTGTGATGGTGATGCTGTCGAAGAAACCTGGCAACATGGAAGAACCCACGCGGCCAGGAATGCCCGGCTCCAGATACAGAAGAGCGTCTCGCAGACCCCATGCAATGTCGTCTTCCGGGGACGTTGATGACACCTCAAATTCAAATTCACGCACTTTTGATTCTTCCAGCAACTATGGCACTAACACTGCTACTTCTGCAACAACAAGCTCCAATGCTACTACTACTGCAGAAGTAGAACGGCGAGGGAAACAACCAATGCATGGTTCATTAGGTGCTTGA 987 0.4813 MGHPPDQCEQNQHASIINHIFGFSVRQLRSIPKRTEPNPFAFVSFHGLILGPHSAMTKPNHTFFHNLIKPFKFSSSNEEGQSEEEEIQNLAVQEQKIFPYETLVAATNKFHILNKLGEGGFGPVFKGKLSDGREIAVKKLSHRSSQGKTQFINEAKLLARVQHRNVVTLFGYCTHGAAEKLLVYEYAYRLYKKGRALEMMDPTLASSVATEQVEMCIQLGLLCTQSDPQLRPTMGRVMVMLSKKPGNMEEPTRPGMPGSRYRRASRRPHAMSSSGDVDDTSNSNSRTFDSSSNYGTNTATSATTSSNATTTAEVERRGKQPMHGSLGA 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g0871 328 SUPERFAMILY Protein kinase-like (PK-like) 96 187 IPR011009 -
Aed11g0871 328 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 185 297 - -
Aed11g0871 328 MobiDBLite consensus disorder prediction 274 314 - -
Aed11g0871 328 ProSiteProfiles Protein kinase domain profile. 110 328 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed11g0871 328 Pfam Protein tyrosine and serine/threonine kinase 111 187 IPR001245 GO:0004672|GO:0006468
Aed11g0871 328 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 61 186 - -
Aed11g0871 328 PANTHER RECEPTOR-LIKE KINASE 61 186 - -
Aed11g0871 328 PANTHER RECEPTOR-LIKE KINASE 185 297 - -
Aed11g0871 328 Gene3D Phosphorylase Kinase; domain 1 72 186 - -
Aed11g0871 328 MobiDBLite consensus disorder prediction 242 328 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g0871 Aed-Chr11 13714329 13722174 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed11g0871 186 260 Receptor kinase-like Gene Family AT4G23190 35.526 1.53e-10 60.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Aed11g0871 PK_Tyr_Ser-Thr 2e-13 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed11g0871 - - gmx:100811523 228.794