Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g0808 ATGTCGTTCCCTCTTCTCTTTACACTCTCTTCTCTTTACCTTCTCCTCGCCCTGTCGTTTTATCTCTCTCACGTCGTTTGCTCCACCACGCACCCCGACTTCCTTCCCCTATTGTCGTTCAAAGCCTCCTCCGACCCTCTCAACACATCACCACTACTCTCCCAATGGAACTCCACCTCCTCCAACCCCTGCACCTGGCGCGGCGTCTCCTGCAACCTCCGCAACAGCAACCGCGTCTCCCGCCTCGTCCTCGAAAACCTCAACCTCTCCGGCGCCGGCGCCGCCTCCATCCTCCCCCTCACCTCCCTCTCCCAGCTCCGCATCCTCAGCCTTAAAAGCAACCGTTTTGAGGGTCCTATACCCACCCACCTCGCCAACCTCACCGCCCTCAAGCTCCTCTTCCTCTCTTACAATCACTTCCACGGCGAAATCCCCGTCTCCTTCGCCGCCTCCCTCCCCCACCTCTACCGCCTCGATCTCTCCCACAACCGCCTCTCCGGCGAAATCCCCGCCGCCGTCAACCGCCTAACCCACCTCCTCACCCTCCGCCTCGACAACAACAACCTCCGCGGCCGCATTCCCAACCTCAACAGCCTCTCACAGCTTCAAGACTTCGACGTCTCCAATAACCACCTCTCCGGCCAAATTCCCGATTCTCTTTCGCCTTTCCCCGGATCCGCGTTTTCCAACAACCTCTTCCTCTGCGGAGCTCCGTTACGAAAATGCGAAGACAAAACAAAAGCCATCCCCGCCGTCGCTTCACCGCTGAGGCCTCGAAACGACACCGTTTCGCGTAAGAGTAAAACCCACGCCGCACCGAGGATGGGGGTTTTGGTTTTGATCACCATCGTTCTCGGCGACGTGTTGGTGCTGGCGATTGTTTCATTGCTCCTCTACTGCTATTTCTGGCGGAACTACTCTTCTGCAGCTGCGTTAAAAGAAAGCAAAGAAGAGAGTAGTCATTCGAAGGCGGCGGTGTACGGCGGCGGTGGGATGGTGTTTATGGAAGGGGTGAGGAGGTTTGAGCTGGAGGAGCTGCTGCGGGCGTCGGCGGAGATGCTGGGGAAGGGCGTGTTTGGGACGGCGTACAAGGCGGTGCTGGATGACGGGAGCGTTGTGGCGGTGAAGAGGCTGAAAGAAGTGAGTGTTTTTGGAGGGAAGAGGGAGTTTTTCCAGCAGCGGATGGAAGTGCTTGGGAGGTTGAGACACTGCAATGTTGTACCTCTCAGGGCCTACTATTTCGCCAAAGATGAGAAATTGCTCGTTTCGGATTACATGCCCAATGGCAGCTTGTCCTGGCTCCTCCACGAGTGGGTATTTTCGCGCTACAGATTTTTGTTTTTAGTTGTTCTATTCCACTGCTGA 1365 0.5663 MSFPLLFTLSSLYLLLALSFYLSHVVCSTTHPDFLPLLSFKASSDPLNTSPLLSQWNSTSSNPCTWRGVSCNLRNSNRVSRLVLENLNLSGAGAASILPLTSLSQLRILSLKSNRFEGPIPTHLANLTALKLLFLSYNHFHGEIPVSFAASLPHLYRLDLSHNRLSGEIPAAVNRLTHLLTLRLDNNNLRGRIPNLNSLSQLQDFDVSNNHLSGQIPDSLSPFPGSAFSNNLFLCGAPLRKCEDKTKAIPAVASPLRPRNDTVSRKSKTHAAPRMGVLVLITIVLGDVLVLAIVSLLLYCYFWRNYSSAAALKESKEESSHSKAAVYGGGGMVFMEGVRRFELEELLRASAEMLGKGVFGTAYKAVLDDGSVVAVKRLKEVSVFGGKREFFQQRMEVLGRLRHCNVVPLRAYYFAKDEKLLVSDYMPNGSLSWLLHEWVFSRYRFLFLVVLFHC 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g0808 454 ProSiteProfiles Leucine-rich repeat profile. 178 200 IPR001611 GO:0005515
Aed11g0808 454 Pfam Leucine rich repeat N-terminal domain 35 72 IPR013210 -
Aed11g0808 454 Gene3D Ribonuclease Inhibitor 98 249 IPR032675 -
Aed11g0808 454 Gene3D Ribonuclease Inhibitor 27 97 IPR032675 -
Aed11g0808 454 PANTHER - 24 437 - -
Aed11g0808 454 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 24 437 - -
Aed11g0808 454 SUPERFAMILY Protein kinase-like (PK-like) 352 445 IPR011009 -
Aed11g0808 454 ProSiteProfiles Protein kinase domain profile. 348 454 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed11g0808 454 Pfam Protein kinase domain 351 436 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed11g0808 454 Gene3D Phosphorylase Kinase; domain 1 313 425 - -
Aed11g0808 454 SUPERFAMILY L domain-like 28 238 - -
Aed11g0808 454 ProSitePatterns Protein kinases ATP-binding region signature. 354 376 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g0808 Aed-Chr11 12457694 12461887 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed11g0808 33 436 Receptor kinase-like Gene Family AT1G68400 53.226 2.32e-120 364
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Aed11g0808 Pkinase 1.4e-11 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed11g0808 - - gmx:100810749 568.926