Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g0789 ATGAAAGGAATTGCCAAAGGATTGGTCTACCTGCATGAATTTAGTCCAAAAAAATACGTCCACGGCAACCTGAAGCCAGGTAACATACTGTTAGGACACAGAATGGAGCCCTGCATTTCCGACTTCGGTCTTGGACGCCTTGCTAACATTGCCGGAGGTTCTCCGGCCTTGCAATCCAACTGCATGGCAGCAGAGAAATCACAAGAAAGACAACAACAGAGGAGGAGCTTATCCACAGAATTCTGCATTGACGAGAAGAAGCCGCTGTTGGATGTGTTAGATCTTTATTTAGCAGACGATGCAGCAGATAAGGAAGAAGAAATCATAGCAGTTTTGAAGATTACAATTGCTTGTGTCCATAGCAGCCCAGAAAAAAGACCTATAATGAGGCATGTGCTTGATGCTTTGGATAGATTATCCATGTCTTCTGATTAA 435 0.4368 MKGIAKGLVYLHEFSPKKYVHGNLKPGNILLGHRMEPCISDFGLGRLANIAGGSPALQSNCMAAEKSQERQQQRRSLSTEFCIDEKKPLLDVLDLYLADDAADKEEEIIAVLKITIACVHSSPEKRPIMRHVLDALDRLSMSSD 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g0789 144 PANTHER OS05G0588300 PROTEIN 80 143 - -
Aed11g0789 144 PANTHER OS05G0588300 PROTEIN 1 73 - -
Aed11g0789 144 ProSiteProfiles Protein kinase domain profile. 1 144 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed11g0789 144 Gene3D Transferase(Phosphotransferase) domain 1 1 62 - -
Aed11g0789 144 Pfam Protein tyrosine and serine/threonine kinase 3 67 IPR001245 GO:0004672|GO:0006468
Aed11g0789 144 Gene3D Transferase(Phosphotransferase) domain 1 63 140 - -
Aed11g0789 144 PANTHER RECEPTOR PROTEIN KINASE-LIKE PROTEIN ZAR1 80 143 - -
Aed11g0789 144 PANTHER RECEPTOR PROTEIN KINASE-LIKE PROTEIN ZAR1 1 73 - -
Aed11g0789 144 SUPERFAMILY Protein kinase-like (PK-like) 1 136 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g0789 Aed-Chr11 11718776 11719390 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed11g0789 1 141 Receptor kinase-like Gene Family AT1G25320 42.932 1.09e-37 133
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Aed11g0789 PK_Tyr_Ser-Thr 3.2e-06 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed11g0789 - - ini:109167801 144.821