Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g0784 ATGGAGCAACAGAACACAGCAGACACACGTGAGGCCAAAACGACCAACTCTGCGGAAGTAGGTTCTTTTCGCGTTCAAGAAGGTGTGATAAAGAAGTGCCGCAGAAAAAGTAGAAAGGAGAAAGAGGAGATGGAAAAAAAGATGTTCGATTCTACTGCAATGGGAGGTGGTGGCGTTTCCGAGCAGAGACTCGGTAGAAAAAGAAAGGACGATGAAATTGGTGGTGAGTTTGAAATGTCTGGCAGCACTGAGAAAAAATACGGTCTTAGGGGCCGTAAACAAGAGACGATGGAGCCAAAAGTTACCAGGAGAAAGATCAAGGATGATGTTGCTGAGAAATGTCCTGTGTGCTGTGGTAATTGCAATTGTAAAGCATGCTTGAGCTCTGATGAACTTATTAAGCAAATGAGGGAAGATGCAAAAACTGATAAAGATGAGAAGGTTGAACTCTCTATGTATTTGCTGCAAGTACTTCTTCCGTATTTAAGGCAGTTGGATGAAGAACAATTGATTGAGAATGAGACAGAAGCTAAGATACAAGGGCTCTCAGTCTCCAAGCTAAGTATAGCTAAGGCAGATTACTCTATAGAGGAGCGTGTGTACTGTGACAACTGCAAAACATCAATATTTGATTACCATAGAAGCTGCACAAAATGCTCTTTTGACCTTTGTCTCATCTGTTGCCGCGAGCTTCGTAGTGGGCAGCTTGTAGGTGGTGCAGATCCAATAGAGTCGGAGTTTGTTTATCAAGGCCGTGATTACTTGCATGCTCAAAAAAAAAAGGAAAAGGTAAAACAAAATGCCTCAGATGCTGATGCTAAGCCCGAGGTTCGCGAATGGTCAATATCTGGGTGGCATGCACAAAGTGATGGTAGCATTCCTTGTCCAAAAGTCAATAATGAATGTAACCATGGTTTTCTTGAACTGAGAAGCATATTGGGTCAACATTTTATTTCTGAGTTAGTATGTAAAGCAAAAGAACTAGTGCAAGCATACAAGCTTCAAAATGTAGTTAAGACCCCTGACAACTTCTGTTCATGTTTGAAGCTTGATAAAAACACAGATGTTAGATATAATAATATGAGGAAGGCTGCTTCTCGAGAAGATTTGGTCGATAACTATTTATACTGTCCCAAGGCTGTAGATCTTCAGTACAAGAATTTAAGGCATTTTCAGTGCCATTGGGAAAAGGGTGAGCCTGTCATTGTCAGCAATGTGCTTGAATGTACATCTGGTTTAAGCTGGGAACCACTTGTCATGTGGCGTGCATTACGTCATGTAACTAATACCAAGCGTAGTCAACATTTGGCTGTGAAAGCAATTGATTGCTTAGATTGGACTGAGGGGGAAATTAATATCCACCAATTCTTTACTGGGTATACAGATGGTCGTAAGGATTGGCTTTCATGGCCTCAGATATTGAAGTTAAAAGATTGGCCTCCTTCTAATTTGTTTGAGGAACAATTGCCTCGTCATTGTGCTGAGTTCATATCTTCCTTGCCCTTCAAGGAATATACCGATCCTCACAAAGGTGCTCTTAACCTTGCTGTGAAGTTGCCTAATGGTTCACTAAAGCCAGACATGGGGCCAAAAACATATATTGCTTATGGATTTCCTCAGGAGCTTGGGCGTGGTGATTCAGTGACTAAGCTCCATTGTGATATGTCTGATGCAGTAAATGTGTTGACTCATATTGCTGAAGTTAAATTGGAATCTGATCAACTTACTGTCATTAAGAATTTGAAACAAAACCACCTTGAGCAAGACAAAAGGGAGCTACTTGGTGATGATCAGGATGGAGAAACTAATGTTGACTTGCTTAATAATTCATCTTCTACCATAAATTCTTTGGACAAGCAAAATAGTGTGGAAGTCATGGAACATGAAGGTGGATTATGTGATGGGAAAGAAGTTGATCAGTTTCATCAACCCTCTGGTAGTAATGAGGATGGTCTTCCATGTGGATCAGAGCTCAAAGAGGTTGATGAAGTAAAAATGAAACAAGGTGATTTGTTGTTTGGGGGGGATGTTTCAGATGGTGCTCTTTGGGATATTTTTCGGAGACAAGATGTACCTAAATTGCAGGAATATCTGAAGAAGCATTTCAGAGAGTTCAGGCATGTCCATTGCTGCCCTTTAAAGCAGGTTATTCATCCCATCCATGACCAGACCTTCTATCTGACTATGGAGCATAAGAGGAAGCTTAAGGAGGAGTATGGAATTGAGCCCTGGACTTTTATTCAGAAGTTAGGAGATGCTGTTTTTATCCCAGCTGGTTGTCCTCACCAAGTCAGAAATCTGAAGTCATGTATCAAGGTTGCTATGGATTTTGTGTCTCCTGAAAATGTTGAGGAGTGCTTTCGTTTGACAGAGGAATTTCGCACACTTCCAATTAATCACAGTAGAACACAAATCTGCGTTTTGCTGCCATGGAGACCTTTCACTTTCAGTTTCAGAGTGGTGGCTACTAACAGATAA 2478 0.4112 MEQQNTADTREAKTTNSAEVGSFRVQEGVIKKCRRKSRKEKEEMEKKMFDSTAMGGGGVSEQRLGRKRKDDEIGGEFEMSGSTEKKYGLRGRKQETMEPKVTRRKIKDDVAEKCPVCCGNCNCKACLSSDELIKQMREDAKTDKDEKVELSMYLLQVLLPYLRQLDEEQLIENETEAKIQGLSVSKLSIAKADYSIEERVYCDNCKTSIFDYHRSCTKCSFDLCLICCRELRSGQLVGGADPIESEFVYQGRDYLHAQKKKEKVKQNASDADAKPEVREWSISGWHAQSDGSIPCPKVNNECNHGFLELRSILGQHFISELVCKAKELVQAYKLQNVVKTPDNFCSCLKLDKNTDVRYNNMRKAASREDLVDNYLYCPKAVDLQYKNLRHFQCHWEKGEPVIVSNVLECTSGLSWEPLVMWRALRHVTNTKRSQHLAVKAIDCLDWTEGEINIHQFFTGYTDGRKDWLSWPQILKLKDWPPSNLFEEQLPRHCAEFISSLPFKEYTDPHKGALNLAVKLPNGSLKPDMGPKTYIAYGFPQELGRGDSVTKLHCDMSDAVNVLTHIAEVKLESDQLTVIKNLKQNHLEQDKRELLGDDQDGETNVDLLNNSSSTINSLDKQNSVEVMEHEGGLCDGKEVDQFHQPSGSNEDGLPCGSELKEVDEVKMKQGDLLFGGDVSDGALWDIFRRQDVPKLQEYLKKHFREFRHVHCCPLKQVIHPIHDQTFYLTMEHKRKLKEEYGIEPWTFIQKLGDAVFIPAGCPHQVRNLKSCIKVAMDFVSPENVEECFRLTEEFRTLPINHSRTQICVLLPWRPFTFSFRVVATNR 825
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g0784 825 Gene3D Cupin 372 803 - -
Aed11g0784 825 PANTHER JMJC DOMAIN-CONTAINING HISTONE DEMETHYLATION PROTEIN 107 801 IPR045109 GO:0032454|GO:0033169
Aed11g0784 825 MobiDBLite consensus disorder prediction 62 104 - -
Aed11g0784 825 SUPERFAMILY Clavaminate synthase-like 387 801 - -
Aed11g0784 825 MobiDBLite consensus disorder prediction 34 104 - -
Aed11g0784 825 MobiDBLite consensus disorder prediction 1 20 - -
Aed11g0784 825 Pfam JmjC domain, hydroxylase 681 777 IPR003347 -
Aed11g0784 825 PANTHER - 107 801 - -
Aed11g0784 825 ProSiteProfiles JmjC domain profile. 508 794 IPR003347 -
Aed11g0784 825 SMART cupin_9 489 794 IPR003347 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g0784 Aed-Chr11 11658691 11671223 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Aed11g0784 JmjC 4.6e-15 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed11g0784 K15601 - gmx:100797799 1362.44