Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g0769 ATGGACAATAATAATATTCTGGGTCTTCTAAAACTTCGAATTAAAAGAGGCATTAATCTTGCAATTCGCGATGCTCGTGCCAGCGATCCTTATGTCGTCGTCCACATGGGCGATCAGATTAATCTCGTATTGATGCAGAAGGTGAAGACTCGTGTTATTAAAAACAACTGCAATCCTAAATGGGATGAAGAATTGACCCTTACTGTCAAGGACGTTAAAGCCCCAATACTTCTGACAGTTTTTGACAAAGACACTTTCTCTGTGGATGACAAAATGGGTGACGCAGAGATAGACTTAGCACCATATATTCAGTCTATGAAGATGGGGATGAGCAAGCTCCCAAATGGCTGTTCACTCAAAAGGGTTCAACCAGCTAGAACTAATTGCCTTTCTGAAGAGAGCAGCTGCATTTGGCAAAATGGTAAGGTTGTCCAAGAAATGTTCTTGAGATTGAGAAATGTTGAGAGCGGCGAATTAGTCGTGGAAATTGAGTGGGTTGATGTTGTCGGTTGCAAGGGCTTGCCACGTTGA 531 0.4237 MDNNNILGLLKLRIKRGINLAIRDARASDPYVVVHMGDQINLVLMQKVKTRVIKNNCNPKWDEELTLTVKDVKAPILLTVFDKDTFSVDDKMGDAEIDLAPYIQSMKMGMSKLPNGCSLKRVQPARTNCLSEESSCIWQNGKVVQEMFLRLRNVESGELVVEIEWVDVVGCKGLPR 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g0769 176 Pfam C2 domain 9 105 IPR000008 -
Aed11g0769 176 Gene3D C2 domain 4 172 IPR035892 -
Aed11g0769 176 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 6 110 IPR035892 -
Aed11g0769 176 SMART C2_3c 9 111 IPR000008 -
Aed11g0769 176 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4 5 172 IPR044562 -
Aed11g0769 176 CDD C2_ArfGAP 7 157 - -
Aed11g0769 176 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 10 5 172 - -
Aed11g0769 176 ProSiteProfiles C2 domain profile. 1 112 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g0769 Aed-Chr11 11370809 11373953 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed11g0769 47 176 C2H2 Transcription Factor Family AT1G70790 63.636 6.44e-60 181
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed11g0769 - - gmx:100788395 296.204