Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g0758 ATGCGGAAACGGCCAAAACATAAGCTACCCCTTCTACATCCAAGGCACGCAGAAACCCTTCTGCGGCCAGCCAGGCTTCGAGCTAACGTGCGACCCCAACGGTTTCCCAATCCTGACCCTCATGTACACCCCGTACACAGTCCACCAAATCTTCTACAACAACCACTCCCTCCGGATCTCGAACCCTGTCTTTTCTCAATCCAGCAAGTCTTCTGCTTCTTCATCTTCATCCTTGTGCATCGCTCCCACTCAGAACCTCACGGTCGGGATGTACAGGTTCCGCGTCGTGCCGAACCAGAGGGATCTGTTCGTCCTCTACGGTGCGACTGCGCAGCGCTCCCCGAGAGGGTGGCGCGGGAGCAGGTCATCGGATGTTCAAATTTAAGTGCAACTGCAACGGCGTCGTCGGTTGTGGTGGCGTTGGAGAAGGAAGATCGGGATTTGGCGGCGGCGCGGGAGAGTTGTAAAAACGGTGCGGTGAATGCGACGGTGGTGGAAGACACGAACGGAGGAGGAGTTCGAGAGGCGCTGCGGAGAGGGTTTCTGTTGTTCTGGAACGCGAGTAACTGCGATGAATGCAAGAGCAGTGGAGGGAGGTGCGGCTTCGACACCGACCGTCGCGTCTATGCTTTTAGGTGTTACTGTCATGATCGGCCTCATGCTGTGAAATGTAACAATACTACAGGAACAAAGGGGTTGAGTCCTAAGGCCAGAAAAATAGTCATAGGTTTCAGTGTTGTAATACTCCTATGCATCTTGATGATTGGGTTGCTCCTACGTTGCAAAAGAAAACGCAGTTCCTCCTCAAGAGGTGAATTCCAAACAAGAAGTAATACTTATTCTACACCATCCTCTCCGAACGCAGATGACGTCGAAAGTGGCAGTGTGTACTTTGGAGTTCCCCTCTTCTCCTACAAGGAACTTGCAGAAGCGACTAACCGTTTTGACCTTAATAAACAAATTGGAGATGGAGGCTTTGGGACTGTCTACTATGGGAAACTAAAAGATGGAAGGGAAGTTGCTGTCAAGCACTTGTATAACCATAACTACAGGCGAGTAGAGCAGTTCATGAATGAAATTCAGATCCTCACACGTTTGCGCCATCGGAATCTTGTGTCACTCTATGGCTGCACTTCGCGCCAGAGCCGCGAGCTCCTTCTTGTGTATGAATACATTCCAAACGGCACAGTTGCCAGCCATCTCCATGGGGAATTGGCAAAGCCTGGCTTACTAACATGGTCCATACGAATCAAAATCGCGAAGATCCAAGAAAGGGCATTGAGTGAATTGGTTGACCCTTATCTGGGTTTTGATTCAGATAAAGAGGTGAAGAGGATGATAGTTGAGGTGGCAGAATTGGCATTTCAGTGTTTGCAACAGGACAGGGAATTGAGACCTTCAATGGATGAAGTCCTTGAGGTGTTGAAGAGAATTGAAAGTGGGAAGGATGAAGTAAAGCAAATAGAAGAAGCAGTAGTTCATGGTTCTGAGGTGTACCATCAAGAAATGAAACAAAATACTTCAAATGATGCTAAGTCTCAACTTGACATTTACTTGAGTGAGTCATGTTTAGTTATTGCGTGCTGGGCCTTGGATGACCCAATTGGGGCTTTTGTGTGGCCTTGCTAG 1629 0.4886 MRKRPKHKLPLLHPRHAETLLRPARLRANVRPQRFPNPDPHVHPVHSPPNLLQQPLPPDLEPCLFSIQQVFCFFIFILVHRSHSEPHGRDVQVPRRAEPEGSVRPLRCDCAALPERVAREQVIGCSNLSATATASSVVVALEKEDRDLAAARESCKNGAVNATVVEDTNGGGVREALRRGFLLFWNASNCDECKSSGGRCGFDTDRRVYAFRCYCHDRPHAVKCNNTTGTKGLSPKARKIVIGFSVVILLCILMIGLLLRCKRKRSSSSRGEFQTRSNTYSTPSSPNADDVESGSVYFGVPLFSYKELAEATNRFDLNKQIGDGGFGTVYYGKLKDGREVAVKHLYNHNYRRVEQFMNEIQILTRLRHRNLVSLYGCTSRQSRELLLVYEYIPNGTVASHLHGELAKPGLLTWSIRIKIAKIQERALSELVDPYLGFDSDKEVKRMIVEVAELAFQCLQQDRELRPSMDEVLEVLKRIESGKDEVKQIEEAVVHGSEVYHQEMKQNTSNDAKSQLDIYLSESCLVIACWALDDPIGAFVWPC 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g0758 542 Gene3D Phosphorylase Kinase; domain 1 288 391 - -
Aed11g0758 542 ProSitePatterns Protein kinases ATP-binding region signature. 321 343 IPR017441 GO:0005524
Aed11g0758 542 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 135 420 IPR044652 -
Aed11g0758 542 Pfam Protein tyrosine and serine/threonine kinase 317 404 IPR001245 GO:0004672|GO:0006468
Aed11g0758 542 MobiDBLite consensus disorder prediction 271 290 - -
Aed11g0758 542 Gene3D Transferase(Phosphotransferase) domain 1 410 500 - -
Aed11g0758 542 SUPERFAMILY Protein kinase-like (PK-like) 296 473 IPR011009 -
Aed11g0758 542 ProSiteProfiles Protein kinase domain profile. 315 542 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed11g0758 542 PANTHER WALL-ASSOCIATED KINASE-LIKE PROTEIN 419 522 - -
Aed11g0758 542 PANTHER WALL-ASSOCIATED KINASE-LIKE PROTEIN 135 420 - -
Aed11g0758 542 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 419 522 IPR044652 -
Aed11g0758 542 MobiDBLite consensus disorder prediction 270 290 - -
Aed11g0758 542 Pfam Wall-associated receptor kinase C-terminal 132 217 IPR032872 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g0758 Aed-Chr11 10648621 10669450 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed11g0758 417 480 Receptor kinase-like Gene Family AT1G25390 48.438 7.25e-13 69.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Aed11g0758 PK_Tyr_Ser-Thr 4.4e-17 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed11g0758 - - gmx:100786779 457.988