Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g0742 ATGGTTATTGACCTCCTTGGGCCAAGTCTTGAAGACTTGTTTGACTATTGCAATAGGGAATTGACTCTGAAAACAGTTTTGATGCTGGCAGATCAGATGATAAACGGAGTTGAGTACATGCACTCTCGGGGGTTTTTGCATCATGAAATAAAGCCTAACAACTTTTTAATGGGTTTAGGCTGTAAGACAAATTAG 195 0.3949 MVIDLLGPSLEDLFDYCNRELTLKTVLMLADQMINGVEYMHSRGFLHHEIKPNNFLMGLGCKTN 64
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g0742 64 Gene3D Transferase(Phosphotransferase) domain 1 1 64 - -
Aed11g0742 64 Pfam Protein kinase domain 12 57 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed11g0742 64 ProSiteProfiles Protein kinase domain profile. 1 64 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed11g0742 64 PANTHER CASEIN KINASE-RELATED 1 63 - -
Aed11g0742 64 SUPERFAMILY Protein kinase-like (PK-like) 1 58 IPR011009 -
Aed11g0742 64 PANTHER CASEIN KINASE I-LIKE 1 63 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g0742 Aed-Chr11 9672015 9672344 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed11g0742 16 57 MAP Kinase Kinase Kinase AT1G62400 41.304 5.70e-07 42.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1 Aed11g0742 Pkinase 7.1e-08 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed11g0742 K08960 - spen:107031276 116.316