Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g0718 ATGTCCTCTGCTATGGGTTCTTTACAAGAAAGAATCACTTCTACCAAAGAGGGGTCCATAACTTTTATTCAAGCAGTTTATGTACCCGCAGACGATTTAACCAATCCTGCCCTTGCTACATCATTTTCACATTTAGATGTTACTATTGTACTATCAAGAAGATTAGCGGCCAAAGGGATCTATCCAGCAGTAGATCCTTTAGATTCAACCTCAACTATGCTCCAACCTTGGATCATTGGTGAAGAACATTATGAGACTGCGCAAAGAGTTAAACAAACTTTACAATGTTACAAAGAACTTCAAGACATTATAGCTATCCTTGGCTTGGATGAATTATCCGAAGAAGATCGCTTAATCGTACATTTCTTATCACAACCTTTTTTCGTAGCAGAAGTTTTTACTAGTTCGTTGGGGAAATATGTTGGTCTAGCAGAAACAATTAAAGGGTTTAAATTGATTCTTTCTGGAGAATTAGATGGTCTTCCTGAACAAGCCTTTTATTTGGTAGAAGTGACGAAAATCATTTTATCTACTAATAGTGGACAAATTGGAGTATTACCAAATCATGCGCCTATTACCACAGCTGTAGATATAGGTATTTTGAGAATACGTCTTCTTAAAGACCAATGGTTAACGATGGCTCTGATGAGCGATTTTGCTAGAATAAACAATAATGAGATCACTATTTTAGTAAATGATGCAGAAAAGAGTAGTGCCATTGATCCATAA 729 0.3621 MSSAMGSLQERITSTKEGSITFIQAVYVPADDLTNPALATSFSHLDVTIVLSRRLAAKGIYPAVDPLDSTSTMLQPWIIGEEHYETAQRVKQTLQCYKELQDIIAILGLDELSEEDRLIVHFLSQPFFVAEVFTSSLGKYVGLAETIKGFKLILSGELDGLPEQAFYLVEVTKIILSTNSGQIGVLPNHAPITTAVDIGILRIRLLKDQWLTMALMSDFARINNNEITILVNDAEKSSAIDP 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g0718 242 PANTHER ATP SYNTHASE 2 187 - -
Aed11g0718 242 CDD ATP-synt_F1_beta_C 78 169 - -
Aed11g0718 242 SUPERFAMILY Epsilon subunit of F1F0-ATP synthase N-terminal domain 162 235 IPR036771 -
Aed11g0718 242 Pfam ATP synthase alpha/beta family, nucleotide-binding domain 3 71 IPR000194 GO:0005524
Aed11g0718 242 Pfam ATP synthase, Delta/Epsilon chain, beta-sandwich domain 162 234 IPR020546 GO:0015986
Aed11g0718 242 Gene3D - 161 242 IPR036771 -
Aed11g0718 242 Gene3D - 1 155 - -
Aed11g0718 242 PANTHER F0F1-TYPE ATP SYNTHASE, BETA SUBUNIT 2 187 - -
Aed11g0718 242 ProSitePatterns ATP synthase alpha and beta subunits signature. 62 71 IPR020003 GO:0005524
Aed11g0718 242 TIGRFAM ATP_synt_epsi: ATP synthase F1, epsilon subunit 162 241 IPR001469 GO:0015986|GO:0045261|GO:0046933
Aed11g0718 242 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 3 77 IPR027417 -
Aed11g0718 242 CDD F1-ATPase_delta 161 241 IPR001469 GO:0015986|GO:0045261|GO:0046933
Aed11g0718 242 SUPERFAMILY C-terminal domain of alpha and beta subunits of F1 ATP synthase 74 169 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g0718 Aed-Chr11 8700284 8701210 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed11g0718 1 125 Primary Pumps ATPases(2) AT1G76030 28.030 5.00e-08 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed11g0718 K02112 - csin:114305725 382.874