Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g0674 ATGGTGAAGTACTCCAGAGAACCCGACAATCCCACCAAGTCCTGCAAGGCCAGAGGCGCGGACCTCAGAGTTCATTTTAAGAACACAAGAGAGACAGCCTTTGCCATCAGGAAGTTGCCCCTGGTTAAAGCTAAAAGATACTTGGAGGATGTTTTGGCCCACAAACAGGCCATTCCATTCCGACGCTTCTGTCGTGGTGTTGGGAGGACAGCCCAAGCTAAGAGCAGACACTCCAATGGGCAAGGACGCTGGCCTGCCAAATCAGCCAAATTTATCCTAGATTTGCTGAAGAATGCTGAGAGTAATGCTGAAGTTAATCAAGCACAGAAGCAAAGACGCCGCACCTACCGAGCTCATGGAAGAATCAATCCTTACATGTCATCTCCATGCCACATTGAGCTGATATTATCAGAGAAGGAAGAGCCTGTGAAGAAAGAGGCGGAGACCCAATTGGCGACAAGCAACAAGAAGAAGGGTAGTGCTCTTCGAAGTGGTGCTTCATCTTAA 507 0.4872 MVKYSREPDNPTKSCKARGADLRVHFKNTRETAFAIRKLPLVKAKRYLEDVLAHKQAIPFRRFCRGVGRTAQAKSRHSNGQGRWPAKSAKFILDLLKNAESNAEVNQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEAETQLATSNKKKGSALRSGASS 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g0674 168 MobiDBLite consensus disorder prediction 143 168 - -
Aed11g0674 168 PANTHER 60S RIBOSOMAL PROTEIN L17 1 168 IPR005721 GO:0003735|GO:0006412|GO:0015934
Aed11g0674 168 ProSitePatterns Ribosomal protein L22 signature. 112 136 IPR018260 GO:0003735|GO:0005840|GO:0006412
Aed11g0674 168 Gene3D Ribosomal protein L22/L17 1 166 IPR036394 GO:0003735|GO:0005840|GO:0006412
Aed11g0674 168 Pfam Ribosomal protein L22p/L17e 17 137 IPR001063 GO:0003735|GO:0005840|GO:0006412
Aed11g0674 168 PANTHER 60S RIBOSOMAL PROTEIN L17-2-LIKE 1 168 - -
Aed11g0674 168 SUPERFAMILY Ribosomal protein L22 1 139 IPR036394 GO:0003735|GO:0005840|GO:0006412
Aed11g0674 168 TIGRFAM uL22_arch_euk: ribosomal protein uL22 4 139 IPR005721 GO:0003735|GO:0006412|GO:0015934
Aed11g0674 168 MobiDBLite consensus disorder prediction 153 168 - -
Aed11g0674 168 CDD Ribosomal_L22 15 136 IPR001063 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g0674 Aed-Chr11 7418386 7420898 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed11g0674 1 161 Cytoplasmic Ribosomal Protein Gene Family AT1G27400 81.250 4.47e-102 289
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed11g0674 K02880 - gmx:100800781 310.071