Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g0642 ATGAGTGTCTTATCTTCTTCGGTGGCTATCATCGTTCTCGTGCTGCTATTCCAACACACTTGCTTTGCTAAACATCCCAAATCTTGTCCTCCTACTTCCTGCGGCAAAATCTACAACATCACGTATCCATTTCGGCTGAGAGGCGATCCGATAAGCTGCGGCCTTCCAGATTACGAGCTCGACTGCGTGGAAAACGCGACCGCGGTGCTGACTCTGTTCTCCGGAAGATACCACGTGCAGGAGATCAACTACGAGAGCTTCCAGATCCGGTTGACGGACGCCGGCGTCGCGGAGGACACCGCCTGCTCCATTCCTCGGTATTTCTTCAACTTCTACAACTTCACTTACATTGGCGGTCCTAACTACTCTGCAGACGGTCCCCTGAGTTTTTCGCGCCGCGATCCTCCGTACGTGGTGTATCTCAATTGCACGTCTCCGGTGACCGGTGATCCTCGATATGTGGTTGCAGAGACCGAGGCTGGTCGTAGTTGCGATTCCACCGGCGGTGGCGGCCATGTCTACGCCGTTCTCGTGGATTTGGATCAGTTCACACTTACAGACATCGAGGTTGGGTGCAGTGTAAAGGTTGCTACCTTTGCAAACTGGACACGCAACAGGGGCGTTTCCTATGGTGATATACGGAGGTGGCTGCGCGACGGAGTTTGGCTGTCTTGGTTCGATGCGGTTATTTGTAAGGATGAATGCGGAAAGGGTGTGGGGTGCCACATCAATCAAACCACGGCGGAAGTTCGATGTGAACGGAGTATCTGCAGAATCTTTGGCTATGAAACAAATAAGTGCGGGATTCAAGATCGGATTCTTGAATACATACGACAAATTTTTGGCTATATAGTAGGTTATCTTAAAAAAGTTATAAGGGGATATGTCTATAGGATAAGATATCACGAACTAATGAGCTGGAATAATGAAGGAGAATTATTTTCAGAATATGCCGTTGGAGAATTCTTTGCACAAAATGCTATACTTCTATTTCTTGTAGCCAGATTTCTATTTGGAGTCACACTTTTGCTTATGATATATATCTATGCATGGCGACGTAGACATTATTCAATGTATGAAAACATTGAAAATTTTCTACTTGATAGCAATCTAAATCCTATTAGGTATGAATACAGAGAAATAAAGAAAATGACTAGAGGTTTCAAAGTGAAATTGGGTGAAGGGGGTTTTGGTTGTGTATACAAAGGAAAAGTTCAAAGTGGAATAGACGTGGCAATAAAGATGTTGACCAAATCCAATGCTAATGGACAAGATTTTATCAATGAAGTGGCTACTATTGGAAGAATACATCATGTGAATGTGGTACGTCTTATTGGATATTGTGTTGAAGGAGAAAAACGTGCTCTAGTTTATGAATTCATGCCTAATGGATCATTGGATAAATATATTTTCTCTAAAAAAGGAAGTGTCCCTTTAAGTTATGATAAAACATATCAAATATGTCTTGGCATAGCTCATGGGATTGCTTATTTGCATGAAGACTGTGATGTGCAAATTCTACATTTTGATATTAAGCCTCATAATATTCTTCTAGACGATAGCTTTATTCCAAAGGTTTCTGATTTTGGACTTGCAAAGTTATACCCTATTAAAGATAAGTCAGTTATTTTAACTGGAGCAAGAGGAACTTTGGGTTACATGGCTCCAGAATTCTTTTACAAAAATATTGGTGGAGTATCATATAAGGCAGATGTCTATAGTTTTGGAATGCTTTTAATGGAAATGGCAGGTAAGAGGAGGAACTCAAATCCTCACGCAGAGAATTCAAGCCAAAGTTATTTCCCCCTGTGGATCTATGATCAATTTATGGAAGAAAAAGATATTCACATAGAAGATGTCTCAGAAGAGGATGCAATTTTAATGAAAAAGATGTTCATAGTTGCTCTTTGGTGTATACAATTGAAACCAAATGATCGTCCTTCAATGAAAAAGGTTGTAGAAATGCTCGAAGGAAAAGTTGAAAGTATTGGTATACCTCCAAAGCCTATTTTTTATGCCGATGAAACATCATCATGGAGTGATTCAACTATTTCTAACAACAACATGGGAGAAACCAAGTCCAATTGTTCATTGGAGAACAACTTTTGA 2109 0.4092 MSVLSSSVAIIVLVLLFQHTCFAKHPKSCPPTSCGKIYNITYPFRLRGDPISCGLPDYELDCVENATAVLTLFSGRYHVQEINYESFQIRLTDAGVAEDTACSIPRYFFNFYNFTYIGGPNYSADGPLSFSRRDPPYVVYLNCTSPVTGDPRYVVAETEAGRSCDSTGGGGHVYAVLVDLDQFTLTDIEVGCSVKVATFANWTRNRGVSYGDIRRWLRDGVWLSWFDAVICKDECGKGVGCHINQTTAEVRCERSICRIFGYETNKCGIQDRILEYIRQIFGYIVGYLKKVIRGYVYRIRYHELMSWNNEGELFSEYAVGEFFAQNAILLFLVARFLFGVTLLLMIYIYAWRRRHYSMYENIENFLLDSNLNPIRYEYREIKKMTRGFKVKLGEGGFGCVYKGKVQSGIDVAIKMLTKSNANGQDFINEVATIGRIHHVNVVRLIGYCVEGEKRALVYEFMPNGSLDKYIFSKKGSVPLSYDKTYQICLGIAHGIAYLHEDCDVQILHFDIKPHNILLDDSFIPKVSDFGLAKLYPIKDKSVILTGARGTLGYMAPEFFYKNIGGVSYKADVYSFGMLLMEMAGKRRNSNPHAENSSQSYFPLWIYDQFMEEKDIHIEDVSEEDAILMKKMFIVALWCIQLKPNDRPSMKKVVEMLEGKVESIGIPPKPIFYADETSSWSDSTISNNNMGETKSNCSLENNF 702
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g0642 702 SMART serkin_6 386 656 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed11g0642 702 ProSitePatterns Protein kinases ATP-binding region signature. 392 414 IPR017441 GO:0005524
Aed11g0642 702 Pfam Wall-associated receptor kinase galacturonan-binding 29 93 IPR025287 GO:0030247
Aed11g0642 702 MobiDBLite consensus disorder prediction 683 702 - -
Aed11g0642 702 PANTHER RUST RESISTANCE KINASE LR10-RELATED 7 683 IPR045874 GO:0004672
Aed11g0642 702 Gene3D Transferase(Phosphotransferase) domain 1 461 663 - -
Aed11g0642 702 Gene3D Phosphorylase Kinase; domain 1 364 460 - -
Aed11g0642 702 PANTHER STRESS-INDUCED RECEPTOR-LIKE KINASE 7 683 - -
Aed11g0642 702 CDD STKc_IRAK 392 658 - -
Aed11g0642 702 SUPERFAMILY Protein kinase-like (PK-like) 372 657 IPR011009 -
Aed11g0642 702 ProSitePatterns Serine/Threonine protein kinases active-site signature. 506 518 IPR008271 GO:0004672|GO:0006468
Aed11g0642 702 ProSiteProfiles Protein kinase domain profile. 386 671 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed11g0642 702 Pfam Protein kinase domain 390 654 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g0642 Aed-Chr11 6643981 6650462 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed11g0642 375 677 Receptor kinase-like Gene Family AT5G38280 49.026 6.71e-100 319
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Aed11g0642 PK_Tyr_Ser-Thr 6.6e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed11g0642 - - gmx:100170745 1053.51