Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g0611 TCCCTCAACCTCCTCCCACTTCAATGCCAAGCCACACGCGCCCTCCTCCGACCCCTGCTCTGCCTTTGTCCACCGTGCCCGCCCCTCGGCTCCGGCGACATGAGCGCCGTGTATCTCGCGGAGCCGAAGGAAGGCGGAGGTGCGGTGTTCGCGGCGAAGGTGATGGAGAGGGAGGACTTAGCGAGGAGGAACAAGGAAGGGAGGGCGAGGACAGAGAGGGAAATTCTGGAAATGTTGGATCATCCTTTTTTGCCCACGCTTTACGCTTCCATCCACGCGCCTAAGTGGCTCTGTTTCTTGACGCCGTTTTGCCCTGGCGGTGACTTGCACGTCCTCCGCCAGCGTTTCCCCAACAAACGCTTCCTCGAATCCGCCGTCAGTGGTCCCTATCGTGGGATTCAAATCGCCTCACCCAGGCCAGGACCATGGGAATATGAGATTTTCCAAATTAATCTGGTTCTAGAATTCCCCACCGCATCATGCTTCCAACCAAAACGCAAGCGGAAGAAGAAGCAAACCCATTTTAACGGGCCTGCGTTCGTGGCCGAGCCCATTAACTTCCGGTCAATATCATTCGTGGGGACCCACGAGTACCTAGCGCCGGAGATCGTGTCCGGGGAGGGACACGGTAGCGCCGTGGACTGGTGGACTTTGGGGATATTCATGTTCGAACTGTTTTACGGCGTGACGCCGTTCAAGGGCATGGACCACGAGCTAACCCTGGCGAACGTGGTGGCTCGAGCCCTTGAGTTCCCGAAGGAACCCGCGGCTTCGGGTGCCATGAAAGAGCTCATATCGCAGCTGCTGGTTAAGGACCCGGCGAAAAGGCTCGGCTCGGTGATGGGGGCTTCCTCGATCAAGCACCACTCCTTTTTCCATGGCGTGAATTGGGCGCTGCTCAGGTGCACCACTCCACCCTTCGTACCGCCACCGCCACCACCTAATGCGAAAGCTGTATATGACGATGATCGTGAAACTTGTCCAGAGATTTTCATTGACTGTAATTAA 1008 0.5704 SLNLLPLQCQATRALLRPLLCLCPPCPPLGSGDMSAVYLAEPKEGGGAVFAAKVMEREDLARRNKEGRARTEREILEMLDHPFLPTLYASIHAPKWLCFLTPFCPGGDLHVLRQRFPNKRFLESAVSGPYRGIQIASPRPGPWEYEIFQINLVLEFPTASCFQPKRKRKKKQTHFNGPAFVAEPINFRSISFVGTHEYLAPEIVSGEGHGSAVDWWTLGIFMFELFYGVTPFKGMDHELTLANVVARALEFPKEPAASGAMKELISQLLVKDPAKRLGSVMGASSIKHHSFFHGVNWALLRCTTPPFVPPPPPPNAKAVYDDDRETCPEIFIDCN 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g0611 335 ProSitePatterns Protein kinases ATP-binding region signature. 29 53 IPR017441 GO:0005524
Aed11g0611 335 SUPERFAMILY Protein kinase-like (PK-like) 28 117 IPR011009 -
Aed11g0611 335 PANTHER OS11G0150700 PROTEIN 156 333 - -
Aed11g0611 335 ProSiteProfiles Protein kinase domain profile. 23 292 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed11g0611 335 Pfam Protein kinase domain 191 292 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed11g0611 335 Pfam Protein kinase domain 29 114 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed11g0611 335 PANTHER FLIPPASE KINASE 1-RELATED 156 333 - -
Aed11g0611 335 PANTHER FLIPPASE KINASE 1-RELATED 29 126 - -
Aed11g0611 335 PANTHER OS11G0150700 PROTEIN 29 126 - -
Aed11g0611 335 SUPERFAMILY Protein kinase-like (PK-like) 187 322 IPR011009 -
Aed11g0611 335 Gene3D Transferase(Phosphotransferase) domain 1 189 310 - -
Aed11g0611 335 Gene3D Phosphorylase Kinase; domain 1 25 132 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g0611 Aed-Chr11 6336861 6339580 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed11g0611 29 311 AGC Kinase Gene Family AT3G12690 44.543 2.58e-84 264
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Aed11g0611 Pkinase 3.3e-19 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed11g0611 K08286 - dcr:108210062 344.354