Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g0554 ATGGCAAAAGATTCTTCTGATACTGATTCCCACCACAGGCGTCCTGGTCTTTTAAAAGATCAAGTTCACTTGGTTAAACGGAAAGGCTCTGATCGTTATGAGGTTGCTCCAATCCAAGACCAACTATCATTTGAGAAGGGTTTTTTTATAGTAATTCGTGGATGCCAATTGTTAGCCCAAAAGAACGATGGAATAATACTGGTAGGGGTGGCAGGTCCTTCAGGGGCTGGGAAGACTGTATTTACTGAGAAGATACTCAACTTCATGCCTAGCATTGCAGTCATTTCAATGGATAATTACAATGATGCTAGTCGAATTGTTGATGGGAATTTTGATGATCCACGCTTAACAGACTATGACACATTGCTCCAGAATCTACAAGATTTAAAGGAAGGAAAGCCAGTACAGGTTCCCATATATGATTTCAAGTCCAGTTCACGTACGGGATACAGGACAGTAGAAGCCCCGACTTCTCGTATTGTGATTATAGAGGGCATCTATGCTTTGAGTGAGAAGTTGCGACCTCTACTGGATCTTCGAGTCTCTGTTACAGGAGGAGTTCACTTTGACCTTGTAAAGCGAGTTATACGTGATATACAACGTGCTGGTCAAGAACCTGAAGAAATTATTCATCAAATATCAGAGACAGTGTATCCAATGTACAAGGCATTTATCGAGCCGGATCTCCAGACAGCACAAATAAAAATCATCAACAAATTCAATCCATTTACTGGATTCCAGAGCCCTACTTACATATTAAAGTCAGGAAGGAAAGTAACAGCTGATCAAATTAAGGCTGTTCTCGCTGAGGATTTTAAGGAAACAACAGAGCAAACTTATGACATATATCTTCTACCACCTGGTGAAGATCCAGAAATATGCCAATCATATTTACGGATGCGGAATAAGGATGGGAAATACAGTCTCATGTTTGAGGAATGGGTGACGGATAGTCCATTTGTCATATCACCAAGAATTACTTTTGAGGTCAGTGTGCGCCTTCTTGGTGGACTAATGGCTTTGGGATACACAATAGCCACTATCCTTAAGAGAAACAGCCATGTCTTTTCTGATGATAGGGTTTGTGTGAAACTAGATTGGCTTGAGCAACTTAATAGACATTATATTCAGGTACAAGGAAGAGATCGTTTAGTTTTAAACTACATAGGAGAGCAGCTAGGTCTAGAAGGTTCCTACATTCCTCGTACCTACATTGAGCAAATTCAAATTGAAAAGCTTGTAAATGAGGTTATGGCCTTACCAGAAGATTTGAAGACAAAGCTCAGCATAGATGAGGATTTGGTTGGAATATCAAAGTCGTATACCAATCAAAGGGACAAAAATCTAGCTAAGGTTGGTGGAAGGTTTGGTGAAAGAAATTCAGACTCCACCGCAATGCCAGTAAGTCAGGGAGCCATCAATCAGCTTTCGGACCAAATTTCTGCCCTCAATGATAGAATGGATGAGTTTACAAATCGCATCGAAGAGCTGAATTCCAAGTTAACCATCAAGAAAAATTCTCCAAGCCAACAAAATATGCCACTTCAATCTGAGACATGCAATGGATCTGCTCCCACCTCTCACTTCATCACTAGTTTGGGCAATGGTTCCCTAACTGGATCCAAAATGACAAATTCCTCTTCGTCATCACAGTTAGCTAAAGATTCTCCTGTAATGGATGAGATATCAAGCATTTCACGCAGTCAGCGCCAGATAATGCATCAATTGGATAATCTCAACAATCTTCTCAGGGGGAGCTTGGGGGAGAAGTCTCTGCCAACACGAACCAACAGCCGGAAAAGCATTGAGATGCCATCAGATTCCATGGGAGCGCGTGTTATGGTGGCGGTTGCAGTTGGTTGCGTGGGGATCTTCTTGATGAAGGGTTTGTTGAATAAAAAGTGA 1905 0.4147 MAKDSSDTDSHHRRPGLLKDQVHLVKRKGSDRYEVAPIQDQLSFEKGFFIVIRGCQLLAQKNDGIILVGVAGPSGAGKTVFTEKILNFMPSIAVISMDNYNDASRIVDGNFDDPRLTDYDTLLQNLQDLKEGKPVQVPIYDFKSSSRTGYRTVEAPTSRIVIIEGIYALSEKLRPLLDLRVSVTGGVHFDLVKRVIRDIQRAGQEPEEIIHQISETVYPMYKAFIEPDLQTAQIKIINKFNPFTGFQSPTYILKSGRKVTADQIKAVLAEDFKETTEQTYDIYLLPPGEDPEICQSYLRMRNKDGKYSLMFEEWVTDSPFVISPRITFEVSVRLLGGLMALGYTIATILKRNSHVFSDDRVCVKLDWLEQLNRHYIQVQGRDRLVLNYIGEQLGLEGSYIPRTYIEQIQIEKLVNEVMALPEDLKTKLSIDEDLVGISKSYTNQRDKNLAKVGGRFGERNSDSTAMPVSQGAINQLSDQISALNDRMDEFTNRIEELNSKLTIKKNSPSQQNMPLQSETCNGSAPTSHFITSLGNGSLTGSKMTNSSSSSQLAKDSPVMDEISSISRSQRQIMHQLDNLNNLLRGSLGEKSLPTRTNSRKSIEMPSDSMGARVMVAVAVGCVGIFLMKGLLNKK 634
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g0554 634 PANTHER PHOSPHORIBULOKINASE/URIDINE KINASE-LIKE PROTEIN 436 624 - -
Aed11g0554 634 PANTHER PHOSPHORIBULOKINASE/URIDINE KINASE-LIKE PROTEIN 6 435 - -
Aed11g0554 634 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 64 236 IPR027417 -
Aed11g0554 634 CDD UMPK_like 67 239 - -
Aed11g0554 634 PANTHER URIDINE KINASE 436 624 - -
Aed11g0554 634 PANTHER URIDINE KINASE 6 435 - -
Aed11g0554 634 PRINTS Uridine kinase signature 132 147 - -
Aed11g0554 634 PRINTS Uridine kinase signature 224 237 - -
Aed11g0554 634 PRINTS Uridine kinase signature 65 82 - -
Aed11g0554 634 PRINTS Uridine kinase signature 188 198 - -
Aed11g0554 634 Coils Coil 473 507 - -
Aed11g0554 634 ProSiteProfiles CYTH domain profile. 248 410 IPR023577 -
Aed11g0554 634 Gene3D - 66 245 IPR027417 -
Aed11g0554 634 Pfam CYTH domain 269 404 IPR023577 -
Aed11g0554 634 MobiDBLite consensus disorder prediction 506 561 - -
Aed11g0554 634 Pfam Phosphoribulokinase / Uridine kinase family 68 236 IPR006083 GO:0005524|GO:0016301
Aed11g0554 634 SUPERFAMILY CYTH-like phosphatases 261 407 IPR033469 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g0554 Aed-Chr11 5096190 5104983 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed11g0554 66 236 PRT Gene Family AT5G40870 28.571 2.86e-18 86.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed11g0554 K00876 - gmx:100781286 1126.69