Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g0553 ATGGAAGACGTGATAACAGAAGCAGCACCCCCATCAAGGTTCTTAGAAGAAGACCTAAACATCTTCACACCCCAATCCCCATCTCTCCCAAAACCCTTCCTCATCTTCCCACACTCCCAACAACAACCCCTCAAACCCTCTCTCCTCATCATCGCCCTCTCCCCCTCCTCCCTCGCCCTCTTCAACAAAACCCAAACCCAAACCCCACTCGCCTCCCTCATCCTCCCGGAACTCCCCCTCTCCCTCCCCGACCACGCCACCTCCATCCTCCCCCTCTCCCCCGGAATCCTCCTCGCCGCCCTCTCCTTCCCCGTCCCCCCGCCCCGCGCCCACGCCGTCGCGCAAATCCTCATCTCCTCAATCCGTCCCGAATCCGTCCTCGTACTCGACTTGCTCGAGCCTGCCAACTATCGCGGAAAGCTCTCCTCCGACGGGGCATTTGCGTTCAAGCTCGAGACCTCCGCCGAGCGAAAACTTTCTCCCAAAGACAAGCTCTTGGGCGAGGAGGTGGAGTACTACCCTTCCGGGAGCGTTGTTGACGGCCTCGGCGCCGCGATCCTCGCGCGCTGTCAGGCGATGGGCGTCCGGGCCAGTCTCTGCGTCTCGTGGCCGCGGTTTGATGCGTCTGCGGTGGCGCTGATCAGGGATTTGCTCCGACGCGGCGCGCTGCGTGGGGTCGAGTTCGCGAGTGATGACGAGGTTTTGAAAATTGGGAGGGTAACAATGGATCCTTCAAAATCATTTTTGCATGCTGTTCTTATCTTTTGCATTCTTGGTGCCACCAGATTGTATGCAATTGGTGACCCTTATGATCTAACACTTGATTACTATGCATCAAGTTGCCCCACTGTGTTTGATGTTGTTAGGAAGGAAATGGAATGTGCAGTGCTTTCTGATCCCCGCAATGCAGCCATGATAGTTCGGTTACACTTCCATGATTGCTTTGTTCAGGTAGGTGGGCCATATTGGGATGTTCCCGTGGGAAGGAAGGATTCAGTGACGGCAAATTTTGATCTTGCCAACACCAATCTTCCCACTCCTGATGAGAGCCTTCTCTCTATCATTGCTAAGTTTCTTTATCAAGGACTATCAGTCACAGATTTGGTAGCCCTTGCAGGAGCTCACACAATTGGCATGGCACAGTGCAAGAATTTCCGGTCAAGAATTTACTACGACTTTGAAACAACCTCGGCGAAAAATCCGATCTCCGAGACTCACCTAAGCAGCCTGAGATCTGTGTGTCCACCTATTGAGGGAGGAGACAACAACACAGCAGCAATGGACTACATGACACCAAATCTCTTTGACAATTCCTTCTATCAGTTACTGCTAAATGGTGAGGGACTTCTCAACTCAGACCAAGAAATGTACTCAAGTGTGTTTGGAATTCAAACTAGGGAGCTTGTGAAGAAGTTTGCAGCAGACCCTCTTGCTTTCTTCCAACAATTCTCTGAGTCTATGGTGAAAATGGGAAACATCACAAACTCAGAAAGCTTCTTCACTGGGGAAGTTAGGCAGAACTGCAGATTTGTCAACACATGA 1542 0.5201 MEDVITEAAPPSRFLEEDLNIFTPQSPSLPKPFLIFPHSQQQPLKPSLLIIALSPSSLALFNKTQTQTPLASLILPELPLSLPDHATSILPLSPGILLAALSFPVPPPRAHAVAQILISSIRPESVLVLDLLEPANYRGKLSSDGAFAFKLETSAERKLSPKDKLLGEEVEYYPSGSVVDGLGAAILARCQAMGVRASLCVSWPRFDASAVALIRDLLRRGALRGVEFASDDEVLKIGRVTMDPSKSFLHAVLIFCILGATRLYAIGDPYDLTLDYYASSCPTVFDVVRKEMECAVLSDPRNAAMIVRLHFHDCFVQVGGPYWDVPVGRKDSVTANFDLANTNLPTPDESLLSIIAKFLYQGLSVTDLVALAGAHTIGMAQCKNFRSRIYYDFETTSAKNPISETHLSSLRSVCPPIEGGDNNTAAMDYMTPNLFDNSFYQLLLNGEGLLNSDQEMYSSVFGIQTRELVKKFAADPLAFFQQFSESMVKMGNITNSESFFTGEVRQNCRFVNT 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g0553 513 ProSitePatterns Peroxidases proximal heme-ligand signature. 367 377 IPR019793 -
Aed11g0553 513 Gene3D Peroxidase, domain 2 345 491 - -
Aed11g0553 513 ProSitePatterns Peroxidases active site signature. 303 314 IPR019794 GO:0004601
Aed11g0553 513 Gene3D - 318 512 - -
Aed11g0553 513 Pfam Peroxidase 318 475 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aed11g0553 513 ProSiteProfiles Plant heme peroxidase family profile. 284 512 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aed11g0553 513 PANTHER PEROXIDASE 11 263 316 - -
Aed11g0553 513 PANTHER PEROXIDASE 11 316 511 - -
Aed11g0553 513 Gene3D - 272 317 - -
Aed11g0553 513 PANTHER PEROXIDASE 72-RELATED 263 316 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aed11g0553 513 PANTHER PEROXIDASE 72-RELATED 316 511 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aed11g0553 513 PRINTS Plant peroxidase signature 305 325 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aed11g0553 513 PRINTS Plant peroxidase signature 281 300 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aed11g0553 513 PRINTS Plant peroxidase signature 362 372 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aed11g0553 513 PRINTS Haem peroxidase superfamily signature 428 443 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aed11g0553 513 PRINTS Haem peroxidase superfamily signature 303 317 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aed11g0553 513 PRINTS Haem peroxidase superfamily signature 363 380 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aed11g0553 513 SUPERFAMILY Heme-dependent peroxidases 272 512 IPR010255 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g0553 Aed-Chr11 5073374 5087257 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed11g0553 291 513 Peroxidase AT1G68850 67.111 4.10e-102 308
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed11g0553 K00430 - gmx:100780750 372.474