Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g0545 ATGGTTCCTAGTGAGATCAGAGGACTCCACTATCTAGCACAAGAAAATCCATTCCTAGTCCAACCAAACTTTGGCCTTCTTCAAAGTGACTTCCCAAATCTCCATCTCAACTTTCCAAACTGCCACTTCCCTCCTTCATCAGGCCATCATCATGACTTTGTTGTCCCTCCTCCCTCCTCATGCCTCAGCAGCAACTCAACCTCCGATGAGGCTGATGAGATCCATTTCAACGTCATCGATGAACGAAAGCACCGGAGAATGATATCGAACCGTGAGTCCGCCCGGAGGTCAAGGATGAGGAAGCAGAAGCACCTGGACGAGCTGTGGTCGCAGGTTGTTAGGCTCAGGACTGAGAATCACAACCTTGTTGACAAACTTAACCATGTCTCTGAGTCACATGATAGAGTCCTCCAAGAGAATGCACAGCTCAAGGAAGAGGCTTCGGATCTTCGCCGAATGATGGCTGACATGCAAATTGGAACCTCTTTTGCTTGCACCTTGGAAGATTTAGAGGACCTTCCATCATGCAACAACAACAACAACACTTCACAACTCAAACCTAATCCTTCAAACTCAAACTCATGA 585 0.4735 MVPSEIRGLHYLAQENPFLVQPNFGLLQSDFPNLHLNFPNCHFPPSSGHHHDFVVPPPSSCLSSNSTSDEADEIHFNVIDERKHRRMISNRESARRSRMRKQKHLDELWSQVVRLRTENHNLVDKLNHVSESHDRVLQENAQLKEEASDLRRMMADMQIGTSFACTLEDLEDLPSCNNNNNTSQLKPNPSNSNS 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g0545 194 Coils Coil 126 160 - -
Aed11g0545 194 SUPERFAMILY Leucine zipper domain 82 132 IPR046347 GO:0003700|GO:0006355
Aed11g0545 194 CDD bZIP_plant_GBF1 83 134 IPR045314 GO:0003700|GO:0006355
Aed11g0545 194 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 85 100 IPR004827 GO:0003700|GO:0006355
Aed11g0545 194 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 80 143 IPR004827 GO:0003700|GO:0006355
Aed11g0545 194 PANTHER BZIP PROTEIN (ATBZIP48) 1 191 - -
Aed11g0545 194 PANTHER BASIC LEUCINE ZIPPER 43-RELATED 1 191 IPR044521 -
Aed11g0545 194 SMART brlzneu 78 142 IPR004827 GO:0003700|GO:0006355
Aed11g0545 194 Gene3D - 80 135 - -
Aed11g0545 194 Pfam bZIP transcription factor 82 140 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g0545 Aed-Chr11 4980243 4980827 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed11g0545 23 170 bZIP Transcription Factor Family AT3G30530 57.595 5.85e-51 160
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Aed11g0545 bZIP_1 1.7e-12 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed11g0545 - - gmx:778126 308.531
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed11g0545 11 4980243 4980827 Aed11g0545 11 4980243 4980827 ECH