Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Aed11g0545 | ATGGTTCCTAGTGAGATCAGAGGACTCCACTATCTAGCACAAGAAAATCCATTCCTAGTCCAACCAAACTTTGGCCTTCTTCAAAGTGACTTCCCAAATCTCCATCTCAACTTTCCAAACTGCCACTTCCCTCCTTCATCAGGCCATCATCATGACTTTGTTGTCCCTCCTCCCTCCTCATGCCTCAGCAGCAACTCAACCTCCGATGAGGCTGATGAGATCCATTTCAACGTCATCGATGAACGAAAGCACCGGAGAATGATATCGAACCGTGAGTCCGCCCGGAGGTCAAGGATGAGGAAGCAGAAGCACCTGGACGAGCTGTGGTCGCAGGTTGTTAGGCTCAGGACTGAGAATCACAACCTTGTTGACAAACTTAACCATGTCTCTGAGTCACATGATAGAGTCCTCCAAGAGAATGCACAGCTCAAGGAAGAGGCTTCGGATCTTCGCCGAATGATGGCTGACATGCAAATTGGAACCTCTTTTGCTTGCACCTTGGAAGATTTAGAGGACCTTCCATCATGCAACAACAACAACAACACTTCACAACTCAAACCTAATCCTTCAAACTCAAACTCATGA | 585 | 0.4735 | MVPSEIRGLHYLAQENPFLVQPNFGLLQSDFPNLHLNFPNCHFPPSSGHHHDFVVPPPSSCLSSNSTSDEADEIHFNVIDERKHRRMISNRESARRSRMRKQKHLDELWSQVVRLRTENHNLVDKLNHVSESHDRVLQENAQLKEEASDLRRMMADMQIGTSFACTLEDLEDLPSCNNNNNTSQLKPNPSNSNS | 194 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Aed11g0545 | 194 | Coils | Coil | 126 | 160 | - | - | |
Aed11g0545 | 194 | SUPERFAMILY | Leucine zipper domain | 82 | 132 | IPR046347 | GO:0003700|GO:0006355 | |
Aed11g0545 | 194 | CDD | bZIP_plant_GBF1 | 83 | 134 | IPR045314 | GO:0003700|GO:0006355 | |
Aed11g0545 | 194 | ProSitePatterns | Basic-leucine zipper (bZIP) domain signature. | 85 | 100 | IPR004827 | GO:0003700|GO:0006355 | |
Aed11g0545 | 194 | ProSiteProfiles | Basic-leucine zipper (bZIP) domain profile. | 80 | 143 | IPR004827 | GO:0003700|GO:0006355 | |
Aed11g0545 | 194 | PANTHER | BZIP PROTEIN (ATBZIP48) | 1 | 191 | - | - | |
Aed11g0545 | 194 | PANTHER | BASIC LEUCINE ZIPPER 43-RELATED | 1 | 191 | IPR044521 | - | |
Aed11g0545 | 194 | SMART | brlzneu | 78 | 142 | IPR004827 | GO:0003700|GO:0006355 | |
Aed11g0545 | 194 | Gene3D | - | 80 | 135 | - | - | |
Aed11g0545 | 194 | Pfam | bZIP transcription factor | 82 | 140 | IPR004827 | GO:0003700|GO:0006355 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Aed11g0545 | Aed-Chr11 | 4980243 | 4980827 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Aed11g0545 | 23 | 170 | bZIP Transcription Factor Family | AT3G30530 | 57.595 | 5.85e-51 | 160 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | bZIP | Aed11g0545 | bZIP_1 | 1.7e-12 | CL0018 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Aed11g0545 | - | - | gmx:778126 | 308.531 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Aed11g0545 | 11 | 4980243 | 4980827 | Aed11g0545 | 11 | 4980243 | 4980827 | ECH |