Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g0542 ATGGCTTTTAGTTATCGTGTCTCGATGATTGTAAATATTGTTATTCTCTTTCTTGTTTCCTTGATGTTGTCGACGCCGGTCATGGCAACGGCACAATGCGTGAAGCAAGAAGGAGGATGCCATGACAAGGTGGAGGCGTTCAAGCTGAAAATCATTGCCATATTCTGCATACTGGCGACCAGCATGGTGGGGATTTCACTACTGTTGGTCTCTCGGGCAGTCCCGTCGCTGCAGCCGGACCGCGACGTGTTTGTCCTCGTGAAGGATTTTGCCTCCGGTGTGATACTGGCCACCGGTTACATGCACGTCATGCCAGATTCCTTCGACGACCTCACGTCGGAGTGCTTGCCGGAGCGGCCATGGCGGAAGTATCCGTTCACCACTTTCATCGCCATGCTCGCTGCGATCTTCACTCTCATGGTGGATTCCTTCTCCATCAATTTCTTCCGGAAGAAGCTCACTACTCCCGCCGCCGCCATTGACGATCACACTACCACGGCTTGTTCCCTTGAAGCCGGTGAAATGAAGGACGTGGAAATGTTAGATCATGATACGCATGGGGATGATGGAGATGGAAAGAGCGTGAGTGGGGAGCGGTTGCTACGTTATCGTGCGGTAGCTCAGGTGTTGGAGATAGGGATTGTGGTGCACTCGGTGGTGATTGGATTGTCATTGGGAGCTTCGGTGAACCCTTGCACGATTAGGCCTCTCATTGCTGCGCTTTGCTTTCATCAAATGTTCGAGGGAATGGGCCTTAGGTGGTTGCATACTTCAGGTGATTCATTCATATCTCAATGTTTCTATTTTTAA 810 0.5086 MAFSYRVSMIVNIVILFLVSLMLSTPVMATAQCVKQEGGCHDKVEAFKLKIIAIFCILATSMVGISLLLVSRAVPSLQPDRDVFVLVKDFASGVILATGYMHVMPDSFDDLTSECLPERPWRKYPFTTFIAMLAAIFTLMVDSFSINFFRKKLTTPAAAIDDHTTTACSLEAGEMKDVEMLDHDTHGDDGDGKSVSGERLLRYRAVAQVLEIGIVVHSVVIGLSLGASVNPCTIRPLIAALCFHQMFEGMGLRWLHTSGDSFISQCFYF 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g0542 269 PANTHER ZINC TRANSPORTER 7 23 252 - -
Aed11g0542 269 Pfam ZIP Zinc transporter 47 252 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Aed11g0542 269 PANTHER ZINC/IRON TRANSPORTER 23 252 - -
Aed11g0542 269 TIGRFAM zip: ZIP zinc/iron transport family 35 252 IPR004698 GO:0005385|GO:0016021|GO:0071577
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g0542 Aed-Chr11 4931333 4932259 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed11g0542 35 252 Inorganic Solute Cotransporters AT1G31260 48.198 1.98e-69 216
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed11g0542 K14709 - gmx:100784872 341.658