Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g0536 ATGAGTGACAAAGAAAAGTTTGAGGTGGATAGAAACGAGGATCCTATGAATTATTCCAGTGGAATGCACTCTGATTGGAGATTTGGGGGTGCAAATCTTGCAAATTCTTCTGTAGGTTTGGTTGGCTTGGCGAATTCTATGAATGTCAGCAGAGGGGATTTGATTGGTTCTTCTTCTTCATGTTCCTCTGCTTCAATGGTGGACTCATTTGGTCCAAACTACTGGGACAACAACCCCACCAGTTCCCAAAACTTGGGATTTTGTGACAACATTAATGTCAACAACAACGGGGGCAACACTTCAAACACTGCTGGAATCAGAAAAGAAGGCTTTGGCTTCCAAAGAGTTGGTCAGGATCATCATGGAGGAACACTTGAAATGGGTTGGAACCCTGCTAATTCTATGTTACCAAATGGACCAGGGATGTTCCCCCAGAGTTTATCTCAGTTTCCAACTGATTCTGGATTCATTGAGAGAGCTGCAAGGTTCTCATGCTTCAGTGGAGGGAATTTTGGTGACATGGTGAACTCATATGGGATTGCTCAATCCATGGGGCTGTATGGAGCAGCAAGAGATGCTATCATTGCAAGCCATGGCATGAAACCAGTAGTATCTGGAGGACAATCTCAAGGAGGTGATATGAGTGTAGTTGATGTTGCAAAAGATGTGTCTCCATCTGTTGAGCATCTTGCTGCTACTAAAGGAAGCCCTCTCAAGAGTAGTGATAGAAGAAGTGAAGGCCATGTTATATCTCAAGAGGAAGGGAAGCATTCTCTTGTTAGGCCTGCTAATGAGTCTGATAGAGGTGAATCCAGTGATGATGGTGGTGGTGGCCAGGATGATTCCCCAATGTTGGAGGCCAATGGAGCTCAAGAACTACCTAGTGAAGGTGCAAAGGATAACTCTGAGAATCAACAGATGGGAGACCAACAACCAACTTCAACAGCCAACAAGGCTTCTGGGAAGAATGCCAAACTGGGGTCTCAAGCTTCTGATCCACCTAAGGAGGAATATATACATGTTAGGGCTCGCCGGGGTCAAGCAACAAATAGCCATAGCCTTGCAGAGAGAATTCTTCAACAACGGCCTGGTCCTTCATCCGCACTAGGGTTTCCTCTAGATATGTCCATGGCTTTTCCTCCATTACATCCACCTCAACCAGGGCTGATTCATCCAGTAATTCCCAACATGGCAAACTCGTCTGATATCCTTCAAAGAACCATCCATCCACAGTTAGCTCCCTTGAATGGTGGTGGATTCAAGGAACCAAGTCAGGCCTCGGAGGGCAGTCACATACCCTTTGCAGAGGACTGA 1314 0.4589 MSDKEKFEVDRNEDPMNYSSGMHSDWRFGGANLANSSVGLVGLANSMNVSRGDLIGSSSSCSSASMVDSFGPNYWDNNPTSSQNLGFCDNINVNNNGGNTSNTAGIRKEGFGFQRVGQDHHGGTLEMGWNPANSMLPNGPGMFPQSLSQFPTDSGFIERAARFSCFSGGNFGDMVNSYGIAQSMGLYGAARDAIIASHGMKPVVSGGQSQGGDMSVVDVAKDVSPSVEHLAATKGSPLKSSDRRSEGHVISQEEGKHSLVRPANESDRGESSDDGGGGQDDSPMLEANGAQELPSEGAKDNSENQQMGDQQPTSTANKASGKNAKLGSQASDPPKEEYIHVRARRGQATNSHSLAERILQQRPGPSSALGFPLDMSMAFPPLHPPQPGLIHPVIPNMANSSDILQRTIHPQLAPLNGGGFKEPSQASEGSHIPFAED 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g0536 437 PANTHER BHLH TRANSCRIPTION FACTOR 10 287 - -
Aed11g0536 437 PANTHER BHLH TRANSCRIPTION FACTOR 358 429 - -
Aed11g0536 437 MobiDBLite consensus disorder prediction 295 327 - -
Aed11g0536 437 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 358 429 IPR024097 GO:0006355
Aed11g0536 437 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 288 358 IPR024097 GO:0006355
Aed11g0536 437 MobiDBLite consensus disorder prediction 239 275 - -
Aed11g0536 437 MobiDBLite consensus disorder prediction 409 437 - -
Aed11g0536 437 MobiDBLite consensus disorder prediction 228 335 - -
Aed11g0536 437 PANTHER BHLH TRANSCRIPTION FACTOR 288 358 - -
Aed11g0536 437 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 10 287 IPR024097 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g0536 Aed-Chr11 4840035 4843451 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed11g0536 59 362 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G68920 36.585 6.00e-42 153
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed11g0536 - - gmx:100783810 568.926
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed11g0536 11 4840035 4843451 Aed11g0536 11 4840035 4843451 ECH