Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g0525 ATGGTAAGATCTCCATGTTGTGATGAAATTGGGTTGAAGAAAGGCCCTTGGACACCTGAAGAAGATCAGAAACTTATTAACCACATTCAACAATATGGACTCAACAGGTGTGGCAAAAGTTGCAGGTTAAGGTGGACAAACTACTTGAGGCCTGACATTAAAAGAGGGAAATTTTCCCAAGAAGAAGAACAAACAATTCTGGATCTCCATGCCATCCTTGGAAACAAATGGTCTGCAATAGCAAGTCATTTACCTGGTAGAACAGATAATGAGATAAAGAATTTTTGGAACACACATCTGAAGAAGAAGCTGATTCAAATGGGTTATGATCCAATGACACACCAGCCTCGAATAATATTTGATGATATCTTCTCAGGCTTGTCTCATCTCATAGCACTGGCTAACCTCAAAGAACACTTAGAACAACATCAGCACAATCAACCATTAAACCTTAATGCAACAACAACAAGGCTTCAAGAAGAGACCATCCAATTGGCCAGGCTCCAACACCACCTCTTGCAGCAGCCTAACACTGTTAACAATGTTTCAAATGACCAATTTGAGAATAACATTAGTACTATGTCATCTGATGTTGGAATTGGAAGAAGTGTCCAATTTGTTAATGATATTGAAACCATGCCTTTCTCTCATTTGCCTGAGTTGAAAACACCACCTTCTTGTTCTTCCTATGAAGCACCATTAAATTATCCAAATTCTCCATGGCTTCTTTCATGTTCAAGCACTACACCTTCTTCTCCTTCTTCACTTGTGGCTCCACCTACTACTAATGTGGAAGATAATTGCAGCACTATTTGGCCTGAGCTCTTACTAGAGGACCCTTTTTTCAACATGATTTCCTAG 861 0.3949 MVRSPCCDEIGLKKGPWTPEEDQKLINHIQQYGLNRCGKSCRLRWTNYLRPDIKRGKFSQEEEQTILDLHAILGNKWSAIASHLPGRTDNEIKNFWNTHLKKKLIQMGYDPMTHQPRIIFDDIFSGLSHLIALANLKEHLEQHQHNQPLNLNATTTRLQEETIQLARLQHHLLQQPNTVNNVSNDQFENNISTMSSDVGIGRSVQFVNDIETMPFSHLPELKTPPSCSSYEAPLNYPNSPWLLSCSSTTPSSPSSLVAPPTTNVEDNCSTIWPELLLEDPFFNMIS 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g0525 286 ProSiteProfiles Myb-like domain profile. 50 100 IPR001005 -
Aed11g0525 286 ProSiteProfiles Myb-like domain profile. 9 49 IPR001005 -
Aed11g0525 286 CDD SANT 57 100 IPR001005 -
Aed11g0525 286 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 50 104 IPR017930 -
Aed11g0525 286 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 240 - -
Aed11g0525 286 Pfam Myb-like DNA-binding domain 55 100 IPR001005 -
Aed11g0525 286 Pfam Myb-like DNA-binding domain 14 49 IPR001005 -
Aed11g0525 286 PANTHER TRANSCRIPTION FACTOR MYB39-LIKE 1 240 - -
Aed11g0525 286 SUPERFAMILY Homeodomain-like 11 96 IPR009057 -
Aed11g0525 286 Gene3D - 57 104 - -
Aed11g0525 286 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 49 IPR017930 -
Aed11g0525 286 Gene3D - 11 55 - -
Aed11g0525 286 SMART sant 13 51 IPR001005 -
Aed11g0525 286 SMART sant 54 102 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g0525 Aed-Chr11 4685259 4686945 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed11g0525 1 285 MYB Transcription Factor Family AT5G10280 45.029 1.38e-81 247
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Aed11g0525 Myb_DNA-binding 3.1e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed11g0525 K09422 - gmx:100785374 366.311