Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g0520 ATGGCCCGAAAACCTATTTGTTCTACCATACAAGTAACTCTCATGATAGTTTTTTTGACAATCCAGGTTGTTTTATCCGACGACAGTGTGCCAATTCCTGCTGACAAGGCACAATTGGGCTCATGGTTTAGTACTAACGTGGGGCCTTTAGATCAAAGAAAAAACACCCTGGACCCTGCATTAGTGACTGCTGAAGCAGGCGCTAAGATTGTGAAGGTAATGCAAGATGGAAGTGGGGAATTTAAAACCGTCACTGAGGCCATTAACAGCGTACCTAGTGGGAACACCAACCGTATAATTATTTACATTGGACCTGGAAATTATAATGAGAAAATCAAAATTGAGAGGACAAAACCTTTTGTGACCTTGTATGGGGTACCAGAGAAAATGCCAAACTTAACTTTTGCGGGCGATGCACAAAAATATGGCACCGTTGATAGTGCTACGTTGATCGTTGAATCAGATTACTTTGTGGCAGCCAACATCATTATCTCGAATGCTTCACCGAAACCTGATGGAAAAAGGCCAGGAGCTCAAGCAGTTGCGTTGCGAATTTCTGGTGACAAAGCAGCATTTTATAATTGTAAGGTGTATGGATTTCAGGACACAGTGTGTGATGATAGGAATAGACATTTTTTCAAAGACTGCTTAATTCAAGGGACCGTGGATTATATTTTTGGAAGTGGGAAGTCACTATATTTGAATACTACACTAGCAACGCTTGCCGACACCGGAATTACAGTTATAACAGCACAAGCAGGAAAAACTACAACAGAAGACACCGGCTACTCGTTTGTACATGGTGACCTTAGTGGAAGTGGGAGTGGCACTTTCTTGGGCAGAGCATGGATGCCTTCTCCCAAAGTGGTCTTTGCTTACTGCACCATGGGAACCATTGTCAATAAGGAAGGTTGGAGTAATGACCGTAAACCTGAAAATGAAAAAAATTCATTTTTTGGAGAGTATCAGAATACGGGACCTGGTGCAGATATCACAGGACGTGTTCCTTGGATAAAGAAACTAACTGAAGCCGAGGTCAAACCTTACATAACACTTGCCATGATTGAAGGTTCTAAATGGCTACTTCCTCCTCCAACTCCTAAAGTCTAA 1110 0.4216 MARKPICSTIQVTLMIVFLTIQVVLSDDSVPIPADKAQLGSWFSTNVGPLDQRKNTLDPALVTAEAGAKIVKVMQDGSGEFKTVTEAINSVPSGNTNRIIIYIGPGNYNEKIKIERTKPFVTLYGVPEKMPNLTFAGDAQKYGTVDSATLIVESDYFVAANIIISNASPKPDGKRPGAQAVALRISGDKAAFYNCKVYGFQDTVCDDRNRHFFKDCLIQGTVDYIFGSGKSLYLNTTLATLADTGITVITAQAGKTTTEDTGYSFVHGDLSGSGSGTFLGRAWMPSPKVVFAYCTMGTIVNKEGWSNDRKPENEKNSFFGEYQNTGPGADITGRVPWIKKLTEAEVKPYITLAMIEGSKWLLPPPTPKV 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g0520 369 SUPERFAMILY Pectin lyase-like 68 363 IPR011050 -
Aed11g0520 369 MobiDBLite consensus disorder prediction 304 324 - -
Aed11g0520 369 Pfam Pectinesterase 71 357 IPR000070 GO:0030599|GO:0042545
Aed11g0520 369 ProSitePatterns Pectinesterase signature 2. 218 227 IPR033131 -
Aed11g0520 369 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 36 362 - -
Aed11g0520 369 Gene3D - 66 364 IPR012334 -
Aed11g0520 369 PANTHER PECTINESTERASE 63-RELATED 36 362 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g0520 Aed-Chr11 4628178 4630047 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed11g0520 9 365 Carbohydrate Esterase AT1G69940 55.182 6.70e-147 418
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed11g0520 K01051 - gmx:100775404 605.905