Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g0511 ATGGTTCGAAAACCTATTTGTTCTATCATACAAGTGACTCTCGTGATAGTTTTTTTGACAATCCAGGTTGTTTTATCCGATGACAGCGTGCCAATTCCTGCTGATAAGGCACAATTGGGCTCATGGTTTAGTACTAATGTGGGGCCTTTATATCAAAGAAAAAACACCCTGGACCCTGCATTAGTGACTGCTGAAGCAGGCGCTAAGGTTGTAAAGGTAATGCAAGATGGAAGTGGGGAATTTAAGACCGTCACTGAGGCCATTAACAGCGTACCTAGTGGGAACACCAACCGTATAATTATTTACATTGGACCTGGAAATTATAATGAGAAAATCAAAATTGAGAGGACAAAACCTTTTGTGACCTTGTATGGGGTACCAGAGAAAATGCCAAACTTAACTTTTGCGGGCGATGCACAAAAATATGGCACCGTTGATAGTGCTACGTTGATCGTTGAATCAGATTACTTTGTAGCAGCCAACATCATTATCTCGAATACTACACTAGCAACGCTTGCCGACACCGGAATTACTGTTATAACAGCACAAGCAGGAAAAACTACAACAGAAGACACCGGCTACTCGTTTGTACATGGTGACCTTAGTGGAAGTGGGAGTGGCACTTTCTTGGGCCGAGCATGGATGCCTTCTCCCAAAGTGGTCTTTGCTTACTGCACCATGGGAACCATTGTCAATAAGGAAGGTTGGAGTAACGACCGTAAACCTGAAAATGAAAAAAATTCATTTTTTGGAGAGTATCAGAACACGGGACCTGGTGCAGATGTCACAGGACGTGTTCCTTGGATAAAGAAACTAACTGAAGCTGAGGTCAAACCTTACATAACACTTGCTATGATTGAAGGCTCCAAATGGCTACTTCCTCCTCCAACTCCTCTAAAGATCCATTGTTTAACATATATAACAAGGATCTAG 933 0.4234 MVRKPICSIIQVTLVIVFLTIQVVLSDDSVPIPADKAQLGSWFSTNVGPLYQRKNTLDPALVTAEAGAKVVKVMQDGSGEFKTVTEAINSVPSGNTNRIIIYIGPGNYNEKIKIERTKPFVTLYGVPEKMPNLTFAGDAQKYGTVDSATLIVESDYFVAANIIISNTTLATLADTGITVITAQAGKTTTEDTGYSFVHGDLSGSGSGTFLGRAWMPSPKVVFAYCTMGTIVNKEGWSNDRKPENEKNSFFGEYQNTGPGADVTGRVPWIKKLTEAEVKPYITLAMIEGSKWLLPPPTPLKIHCLTYITRI 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g0511 310 Gene3D - 173 301 IPR012334 -
Aed11g0511 310 Gene3D - 30 172 IPR012334 -
Aed11g0511 310 MobiDBLite consensus disorder prediction 236 256 - -
Aed11g0511 310 Pfam Pectinesterase 178 288 IPR000070 GO:0030599|GO:0042545
Aed11g0511 310 Pfam Pectinesterase 71 168 IPR000070 GO:0030599|GO:0042545
Aed11g0511 310 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 36 168 - -
Aed11g0511 310 PANTHER PECTINESTERASE 63-RELATED 166 293 - -
Aed11g0511 310 PANTHER PECTINESTERASE 63-RELATED 36 168 - -
Aed11g0511 310 SUPERFAMILY Pectin lyase-like 67 298 IPR011050 -
Aed11g0511 310 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 166 293 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g0511 Aed-Chr11 4517961 4520162 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed11g0511 10 296 Carbohydrate Esterase AT1G69940 40.282 1.36e-80 247
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed11g0511 K01051 - gmx:100775404 280.026