Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g0488 ATGTCCATTCATTCACGCGTAAACACACACCACAACACTCTCTATATCAACTCACTCACAATTAGACAAAACAAACAAACACACACACCTTCCGCGTTGAAAAGAAGAAAAACAGAGCAAACACAAACCCAAACCCCAATTCTTGTTCTTCTTCTTCTTCCAATGGCGTCGTCGGTGCCTTCGGTTCCTCTCCTGAAGGACGAGCTCGACATCGTGATCCCGACGATCCGGAACCTCGACTTCCTCGAGATGTGGCGGCCGTTCTTCGAGGCGTACCACCTCATCATCGTGCAGGACGGGGACCCGAACAGGACAATCAGCGTCCCGAAGGGGTTCGACTACGAGCTCTACAACCGCAACGACATCAACCGCATCCTCGGCCCCAAGGCCTCCTGCATCTCCTTCAAGGACTCCGCTTGCCGCTGCTTTGGCTACATGGTCTCCAAGAAGAAGTACATCTACACCATCGACGACGACTGCTTCGTTGCTAAGGACCCTACTGGGAAGGATATCAATGCACTTGAGCAGCATATTAAGAATCTCCTATGTCCATCCACTCCATTTTTCTTCAACACCCTTTATGATCCTTACAGAGAAGGTGCTGATTTTGTCCGTGGATACCCTTTCAGCCTTCGCGAGGGTGCCCCCACTGCTGTTTCTCACGGCCTTTGGCTCAACATACCTGATTATGATGCTCCAACTCAGCTCGTCAAACCCCGTGAGAGGAACACCAGGTTTGTTGATGCTGTTCTTACCATTCCCAAAGGAACATTGTTCCCCATGTGTGGTATGAATCTGGCATTTGACCGTCAGCTGATTGGACCTGCAATGTACTTTGGACTCATGGGTGATGGTCAACCTATTGGACGATACGATGACATGTGGGCTGGATGGTGTGTTAAGGTTATCTGTGACCATTTGGGCTTGGGAGTGAAGACTGGCCTTCCCTACATCTGGCACAGCAAAGCAAGCAACCCTTTTGTGAATCTCAAAAAGGAGTACAAGGGCATCTTCTGGCAAGAAGAGATCATTCCATTCTTCCAAAGTGCCACCCTCTCAAAAGAGAGCACCTCTGTCCAAAAATGCTACATTGAACTCTCCAAGCAAGTGAAGGAGAAGCTTGGAGCTGTTGATCCCTACTTCATCAAGCTTGCTGATGCCATGGTCACTTGGATTGAAGCTTGGGATGAGCTTAACAACACCACCACCACATCTGAAGAAGCTTCTTCAAACCCAACCAATGGTGCTCCTGCTGCTAAGTGA 1263 0.4925 MSIHSRVNTHHNTLYINSLTIRQNKQTHTPSALKRRKTEQTQTQTPILVLLLLPMASSVPSVPLLKDELDIVIPTIRNLDFLEMWRPFFEAYHLIIVQDGDPNRTISVPKGFDYELYNRNDINRILGPKASCISFKDSACRCFGYMVSKKKYIYTIDDDCFVAKDPTGKDINALEQHIKNLLCPSTPFFFNTLYDPYREGADFVRGYPFSLREGAPTAVSHGLWLNIPDYDAPTQLVKPRERNTRFVDAVLTIPKGTLFPMCGMNLAFDRQLIGPAMYFGLMGDGQPIGRYDDMWAGWCVKVICDHLGLGVKTGLPYIWHSKASNPFVNLKKEYKGIFWQEEIIPFFQSATLSKESTSVQKCYIELSKQVKEKLGAVDPYFIKLADAMVTWIEAWDELNNTTTTSEEASSNPTNGAPAAK 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g0488 420 SUPERFAMILY Nucleotide-diphospho-sugar transferases 90 298 IPR029044 -
Aed11g0488 420 PANTHER UDP-ARABINOPYRANOSE MUTASE 3 56 410 - -
Aed11g0488 420 Pfam Reversibly glycosylated polypeptide 65 399 IPR037595 -
Aed11g0488 420 PANTHER UDP-ARABINOSE MUTASE 56 410 IPR037595 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g0488 Aed-Chr11 4237597 4241858 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed11g0488 K13379 - gmx:100788017 724.546
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed11g0488 11 4237597 4241858 Aed11g0488 11 4237597 4241858 ECH
Aed11g0488 11 4237597 4241858 Aed3g0991 3 7443653 7447405 ECH