Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g0486 ATGCTCAACTCGAGGAAATCCCTGTACATCTCTTCTTCCTCTTCTTATTCTTCATTGTTTTGTATCATTCTCCTCCAACTTACACTTCTCTATGGCCTTGCTTTCTCTGCAAACCATGAAGCCTCAACACTCTTCACATGGCTCCATAGTTCTTCTTCTGCATCACTACCACCTCCTTTTTTCTCCAACTGGAACCTCCATGATCCCAATCCATGCAACTGGACATCCATAACATGCTCCACACTATCCTTTGTCACAGAAATCAACATTCAATCCATCCCTCTAGAGCTTCCAGCACCCTCCAACCTCTCTTCATTCCACTCTCTTCAAAAGCTTGTGATATCAGATGCCAATCTCACAGGAACCATCCCTTCAGACATTGGTGACTGCCCTTTCCTCACTTCCATTGACCTCAGCTCCAACAACCTTGTTGGCTCTATCCCTGCAAGCATTGGCAAACTCAAAGGCCTTCAAAATCTGTCCTTGAACTCCAACCAGCTCACTGGGAAAATCCCTGTGGAGTTGAGCAACTGCATTGGCCTAAAAAGTTTGCAACTTTTTGATAACCAGATAAGTGGGACTATCCCACATGAGCTGGGGAAGTTGTCACAGCTTGAGTCTCTAAGAGCTGGAGGGAACAAAGACATTGTTGGGGAGATTCCTCAAGAGCTTGGAGAATGCAGCAATTTGACTGTGTTGGGACTGGCTGATACAAGAATTTCAGGTTCTTTGCCTGCTTCTTTGGGGAAACTCACAAAGCTTCAGACACTGTCAATTTATACCACCATGCTGTCTGGTGAGATTCCACCTGAATTAGGTAACTGTTCTGAGCTTGTTGACTTGTTCTTATATGAAAACAGCTTGTCAGGGTCTGTTCCATCTGAGCTTGGCAAGCTCAAGAAGCTGGAACAGTTGTTTCTGTGGCAGAATGGTCTTGTTGGGGCAATTCCAGAAGAGATTGGTAACTGCACAAGCTTGAGAAAGATTGATTTCTCTTTGAATTCTTTATCTGGGACTATACCTGTGTCTCTGGGGGGGCTTTTGGAGCTTGAAGAGTTTATGATCAGTGATAACAATGTGTCTGGCTCAATCCCTTCTAGTCTCTCAAATGCTAAGAATCTTCAGCAGTTGCAAGTTGACACAAACCAGCTCTCAGGGTTAATTCCACCAGAGCTTGGGAAGTTGTCAAGCCTCATGGTGTTCTTTGCTTGGCAGAATCAGCTTGAGGGAAGCATTCCCTCCTCTTTGGGGAACTGTAGTAGCCTCCAAGCACTTGACTTGTCGCGAAACGCGCTCACTGGTGGCATTCCTGTTGGTCTATTCCAGCTCCAGAACCTCACAAAACTGCTTCTGATATCCAATGACATATCAGGTTTCATACCAACTGAGATAGGAAGCTGCAGCTCTCTGATAAGGTTGAGGCTTGGAAACAACAGGATTACTGGTAGCATTCCCAAGACAATAGGCAGCCTCAAGAGCTTGAACTTCTTAGACCTCTCTGGGAACCGGCTCTCCGGGTCAGTGCCTGATGAGATTGGAAGCTGCACTGAGCTGCAAATGATAGACTTGAGTATCAACAACTTAGAAGGCCCTTTACCTAATTCCTTGTCTTCACTATCTTCAGTTCAGGTATTGGATGCATCCTCCAACAAGTTTTCAGGTCCTCTACCAGCGAGTTTAGGCCGTCTTGTTTCTCTTAGTAAGCTAATCCTTGGCAATAACTTGTTTTCTGGACCTATTCCTGCATCACTGAGCCTATGTTCAAATCTCCAACTGCTTGATCTTAGCAGCAACAAGATCAGTGGAAGCATACCAGCCGAGCTAGGCCGAATCGAGACACTAGAAATTGCTCTTAATCTCAGTTGCAATTCACTCAGTGGAGTAATCCCACCTCAGATGGCTTCTCTTAACAAGCTTTCAATATTGGATATCTCATACAACCAGTTGGAAGGAGATTTGCAGCCTCTTGCTGAGTTAGACAACCTTGTCTCCCTCAATGTTTCTTACAACAAATTTTCTGGCTGTCTTCCAAATAACAAGCTTTTCAGGCAATTGGCATCAAAAGACTTCACCGCAAATCAAGGGCTATCATGCTTTATGAAGGATTCTGGCAGTGAGGCATTGAATGGAAATGATGCAAGGAAGTCGCGAAGGCTTAAGCTCGCCATTGGATTGTTGATAGCCTTGACAGTAATAATGATTCTTATGGGGATAACTGCTGTGATCAAAGCAAGAAGAGCCATCAGAGATGATGATTCAGAATTAGGGGACTCATGGCCATGGCAATTCATACCATTCCAGAAGCTAAGCTTTTCAGTGGAACATGTACTGAGATGTTTGATCGACAGAAACATAATTGGGAAGGGGTGTTCTGGTGTTGTTTATAAAGCTGAAATGGACAATGGTGAAGTCATTGCTGTGAAGAAACTGTGGCCAACAACAATTGATGAAGAAGGAGAGGCGTTTAAGGAAGAGAAAAGTGGAGTTCGTGACTCATTCTCGGCTGAGGTCAAGACCCTTGGCTCAATCCGTCATAAGAACATTGTCAAATTCTTGGGGTGCTGTTGGAACAGAAAAACAAGACTGCTTATTTTCGATTACATGGCGAATGGAAGTTTGAGTATTGGTATGTGA 2634 0.4431 MLNSRKSLYISSSSSYSSLFCIILLQLTLLYGLAFSANHEASTLFTWLHSSSSASLPPPFFSNWNLHDPNPCNWTSITCSTLSFVTEINIQSIPLELPAPSNLSSFHSLQKLVISDANLTGTIPSDIGDCPFLTSIDLSSNNLVGSIPASIGKLKGLQNLSLNSNQLTGKIPVELSNCIGLKSLQLFDNQISGTIPHELGKLSQLESLRAGGNKDIVGEIPQELGECSNLTVLGLADTRISGSLPASLGKLTKLQTLSIYTTMLSGEIPPELGNCSELVDLFLYENSLSGSVPSELGKLKKLEQLFLWQNGLVGAIPEEIGNCTSLRKIDFSLNSLSGTIPVSLGGLLELEEFMISDNNVSGSIPSSLSNAKNLQQLQVDTNQLSGLIPPELGKLSSLMVFFAWQNQLEGSIPSSLGNCSSLQALDLSRNALTGGIPVGLFQLQNLTKLLLISNDISGFIPTEIGSCSSLIRLRLGNNRITGSIPKTIGSLKSLNFLDLSGNRLSGSVPDEIGSCTELQMIDLSINNLEGPLPNSLSSLSSVQVLDASSNKFSGPLPASLGRLVSLSKLILGNNLFSGPIPASLSLCSNLQLLDLSSNKISGSIPAELGRIETLEIALNLSCNSLSGVIPPQMASLNKLSILDISYNQLEGDLQPLAELDNLVSLNVSYNKFSGCLPNNKLFRQLASKDFTANQGLSCFMKDSGSEALNGNDARKSRRLKLAIGLLIALTVIMILMGITAVIKARRAIRDDDSELGDSWPWQFIPFQKLSFSVEHVLRCLIDRNIIGKGCSGVVYKAEMDNGEVIAVKKLWPTTIDEEGEAFKEEKSGVRDSFSAEVKTLGSIRHKNIVKFLGCCWNRKTRLLIFDYMANGSLSIGM 877
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g0486 877 ProSiteProfiles Protein kinase domain profile. 780 877 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed11g0486 877 Pfam Leucine rich repeat N-terminal domain 38 80 IPR013210 -
Aed11g0486 877 Gene3D Ribonuclease Inhibitor 439 703 IPR032675 -
Aed11g0486 877 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 17 873 - -
Aed11g0486 877 PRINTS Leucine-rich repeat signature 636 649 - -
Aed11g0486 877 PRINTS Leucine-rich repeat signature 494 507 - -
Aed11g0486 877 SMART LRR_typ_2 563 587 IPR003591 -
Aed11g0486 877 SMART LRR_typ_2 491 515 IPR003591 -
Aed11g0486 877 SMART LRR_typ_2 419 443 IPR003591 -
Aed11g0486 877 SMART LRR_typ_2 588 611 IPR003591 -
Aed11g0486 877 SMART LRR_typ_2 154 178 IPR003591 -
Aed11g0486 877 SMART LRR_typ_2 299 323 IPR003591 -
Aed11g0486 877 SMART LRR_typ_2 659 684 IPR003591 -
Aed11g0486 877 Gene3D Ribonuclease Inhibitor 291 337 IPR032675 -
Aed11g0486 877 PANTHER RECEPTOR-LIKE PROTEIN KINASE 2 17 873 - -
Aed11g0486 877 SUPERFAMILY RNI-like 112 504 - -
Aed11g0486 877 Pfam Protein kinase domain 784 873 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed11g0486 877 ProSitePatterns Protein kinases ATP-binding region signature. 786 809 IPR017441 GO:0005524
Aed11g0486 877 Gene3D Ribonuclease Inhibitor 194 290 IPR032675 -
Aed11g0486 877 Gene3D Ribonuclease Inhibitor 36 193 IPR032675 -
Aed11g0486 877 SUPERFAMILY RNI-like 364 681 - -
Aed11g0486 877 SUPERFAMILY Protein kinase-like (PK-like) 757 873 IPR011009 -
Aed11g0486 877 Gene3D Ribonuclease Inhibitor 338 438 IPR032675 -
Aed11g0486 877 Pfam Leucine rich repeat 108 167 IPR001611 GO:0005515
Aed11g0486 877 Pfam Leucine rich repeat 445 504 IPR001611 GO:0005515
Aed11g0486 877 Gene3D Phosphorylase Kinase; domain 1 767 867 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g0486 Aed-Chr11 4229013 4232123 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed11g0486 35 874 Receptor kinase-like Gene Family AT5G56040 48.038 0.0 747
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Aed11g0486 Pkinase 3.9e-10 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed11g0486 - - gmx:100818541 1467.21