Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g0474 ATGGCTTCAAGAAACAAAAGTTTTACTATTCAGGTGGCTTTCATAGTAGCATTTCTCACCATTCATGTTGTTTTATCCGATGATACTGTGCCAATTCCTGCTGATAAGACTCAATTGAAGACCTGGTTTAATAATAACGTGGGACCTTTAGAACAAAGAATGACCACTATGGACCCTGAGTTAGTGACCGCTGAAAAAGGTGGTAAGGTTATGAAGGTAATGCAAGATGGTAGTGGGGAATTTAGAACCATCACTGAAGCCATTAATAACATACCTATTAAAAATACTAATCGTGTGATTGTGTTCATTGGACCTGGAATTTACAATGAAAAAATCAAAATTGAGAAGACAAAGCCTTTTGTAACTTTGTATGGGTTACCGGAGAACAAGCCAAACTTGACATTTGGAGGCACGGCTAAGGAATATGGCACTGTTGATAGTGCTACATTGATTGTTGAATCTGATTACTTCGTGGCAGCCAATATTATTTTCTCGAATTCTGCACCAAGACCCGATGGAAAGCCACTAGGTCAAGCAGTTGCACTGAGAATGTCCGGTGACAAATCGGCATTTTTTAACTGCGAGATGCTTGGATTCCAGGACACCATATGTGATGATAGGAATAGACATTTTATCAAAGACAGCTTAATTCAAGGAACAGTAGATTATATTTTTGGAAGTGGAAAGTCAATGTATTTGAATACTGAATTGAGAACGCTTGGTGACAACACTAGGATTACATTTATAGTGGCACAAGCAAGAAAAACTGAGGAAGAGAAAAATTGCTACTCATTTGTGCATTGTGATGTCACTGGAACTGGAACTAACACTTACTTAGGGAGAGCATGGATGTCTCATCCCAGAGTACTCTTTGCTTATTCCAACATCTCCAGTGTTATCAGAAAAGAAGGGTGGACTAACAACAATCACCCTGAATATGACACAACTGTACGTTTTGGAGAGTATATGAACAAGGGACCTGGTGCAGATCCTGCCGGACGTGTTTTAACTATGCAACTAACTGAAGTGCAGGTAAAACCTTACATTTCACTTGGCTTGATTGAAGGTTCCAAATGGTTACTTCCTCCTCCAACTCCCACAGTTTAA 1107 0.3939 MASRNKSFTIQVAFIVAFLTIHVVLSDDTVPIPADKTQLKTWFNNNVGPLEQRMTTMDPELVTAEKGGKVMKVMQDGSGEFRTITEAINNIPIKNTNRVIVFIGPGIYNEKIKIEKTKPFVTLYGLPENKPNLTFGGTAKEYGTVDSATLIVESDYFVAANIIFSNSAPRPDGKPLGQAVALRMSGDKSAFFNCEMLGFQDTICDDRNRHFIKDSLIQGTVDYIFGSGKSMYLNTELRTLGDNTRITFIVAQARKTEEEKNCYSFVHCDVTGTGTNTYLGRAWMSHPRVLFAYSNISSVIRKEGWTNNNHPEYDTTVRFGEYMNKGPGADPAGRVLTMQLTEVQVKPYISLGLIEGSKWLLPPPTPTV 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g0474 368 Pfam Pectinesterase 72 336 IPR000070 GO:0030599|GO:0042545
Aed11g0474 368 PANTHER PECTINESTERASE 63-RELATED 36 361 - -
Aed11g0474 368 Gene3D - 68 363 IPR012334 -
Aed11g0474 368 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 36 361 - -
Aed11g0474 368 ProSitePatterns Pectinesterase signature 2. 217 226 IPR033131 -
Aed11g0474 368 SUPERFAMILY Pectin lyase-like 71 364 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g0474 Aed-Chr11 4117715 4120357 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed11g0474 9 365 Carbohydrate Esterase AT1G69940 51.811 3.24e-134 385
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed11g0474 K01051 - gmx:100813174 579.711