Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g0470 ATGGATCGGAGCTCGTTCTCACCGGGAACCGGAAAAACCCGAACAAAACCCGACATATACTCAACCTTCGTGGTCCATGACGATGTCGACGACGACGACGACGGCGGAGGAAGAGGAACCTACCGGCGGCGGAAATCCGGCGGGACGCAGCCGCAGGACGATCCGTACGCGACAATGGTGTTCAAAGACAACGGCCACGACGACGACGACGACGACGAAGACTCCTCTCTCCCTCCGCTCCTCAAGCGCCTCCCCAAGGACTTCGGCGGCGGAGCGCCGCTGGACTACGACGACGAAGACGAAGACGACGACGACGGTGCCGGAGACTTCGGCACCATGATCGTGAAGCGCGACCGTCCTTCTTCCAGCATGGTTTCGCCGCCGTGGAAGCCGCGGGGCTCGTCTCAGGCGAGTCCTCTGAACAGATTCGGCGGCGGTGACGACGGCGACGATGAGGACGACGACGGCGGAGGATTCTCGACGTTCGTGGTGAAGTCCGGCGAAAGAGAGTCGGTGAGCGGAACCATGGTGCGACGAACCGGCGGCAGTAGTGGTAGCGGCGGTGTCGGTTCGACGATGGAGAGAGCGGTGGCGAGCATGCAGGGGATGATGGGAAGTGGATCTTCGCAGAACGATGAGGGAAGGCATCATCATTCGATAACGACGAAGGTTTCCACGAGTTCACTCCCTGATAGTGTTACCCGAGAGGACCCTACGACCAAATACGAATTGCTCAATGAACTCGGGAAGGGGTCCTATGGAGCTGTTTACAAAGCAAGAGATTTGAGAACCTCGGAGATGGTTGCCATTAAAGTGATATCGTTATCTGAAGGGGAGGAGGGGTATGAGGAAATCCGTGGCGAGATTGAAATGTTACAACAATGTAATCATCCAAATGTTGTCAGGTATCTTGCAAGCTATCAGGGAGAAGAGTATCTCTGGATAGTGATGGAATACTGTGGTGGTGGTAGTGTTGCTGATTTGATGAGTGTGACTGATGATCCACTGGAAGAGTGTCAAATAGCATATGTCTGTAGAGAAGCACTCAAGGGTCTTGATTATTTGCACTCAATTTTTAAAGTCCATAGAGACATTAAAGGTGGGAATATCTTATTAACTGAACAAGGAGATGTCAAGCTAGGGGATTTTGGTGTTGCTGCACAGCTTACAAGGACTATGTCAAAGCGCAATACGTTCATTGGAACTCCTCATTGGATGGCTCCAGAAGTTATTCAAGAAAGTCGCTATGATGGCAAGGGTGTTCCTCCAAGATCATCAGTACATCCAATGAGGGTTTTATTCATGATATCAATCGAACCAGCTCCGATGCTTGAGGATAAAGAAAAATGGTCTCTATATTTCCATGATTTTGTTGCAAAGTGCCTAACAAAAGAACCTCGTCTCCGCCCTCCCGCATCTGAGATGTTGAAGCACAAATTCTTTGAAAAATGGAAAATTGGATCTGCTGCAATGTTGCCAAAACTAGAAAAGGCAAGGCAAGCCAGGGCTTTAATGGCTTTGCAGGTGCAAACTCTTCCAGCTGAAGAAGACGAGGAGTTAGATTCAAAACTAAATGATGAATATGGAGATACTGTTCCATCCAGACCTCAAAACATTCGTGTTGAGGGGGATGATCTCTCATCACATGGCACTACAAGGAAGCTACATAAAGTCGAAGATGTAGACACGAGTGAAGGCAACTTTGGCACTTTTATAGTCCATGGAGATGAATTACATAAGGCCATGCAAGATGCAGATTCTGCAGTTTCTGTATCTGCTCTAACCAGTGGCACAGGAGGCAGATTGGCTGACTCTGGGATTGAGAGTCAGAATCAGAAAGTTGGTATTACAAACAGCGTCTCTTTTAGAGGATCTAGTGCTACTACCAATACCATTAAATCGTCTTTACCTTATGCTAGTAATTCAACTGAGCAGAGCCTCAAGACCAAAGGTACTTATCGAGCACAAGCCGGAATTGGTGGTGATATAAGCAATAGCATATTCAAGAATGAAACAGTCAGTCGTAAAGCATTTGCTTTACAAGATAAGCTTTGGTCCATTTATGCTGCTGGTAATACAGTACCCATCCCCTTCTTAAGGGCAACAGATATATCACCTATTGCTCTTCTGTCAGACAATGTACTTGGTGGCATACAACAGGATACTGGTGGAACTAGAACAGTGGAAGCATTGCAAGAGCTTTTTAGTGGTGATGGACAGTCCAAAAAGGGCCGGAGAGGACTAAATGAGCAGATGCCTCTTCCTCCAAGCATTTACCAAAGATTGACATCAAGTTCTACTCTAATGAATTTGGCACAGGCTTTAGCTTACCATAAGATGTGTTATGAAGATATGCCTCTGCAGGAGCTGCAAGCCACCCAGGAGCAGCTGACTATTCAAAATCTCTCCGACACACTTCGAACCATTCTTCGGTTGTAG 2439 0.4797 MDRSSFSPGTGKTRTKPDIYSTFVVHDDVDDDDDGGGRGTYRRRKSGGTQPQDDPYATMVFKDNGHDDDDDDEDSSLPPLLKRLPKDFGGGAPLDYDDEDEDDDDGAGDFGTMIVKRDRPSSSMVSPPWKPRGSSQASPLNRFGGGDDGDDEDDDGGGFSTFVVKSGERESVSGTMVRRTGGSSGSGGVGSTMERAVASMQGMMGSGSSQNDEGRHHHSITTKVSTSSLPDSVTREDPTTKYELLNELGKGSYGAVYKARDLRTSEMVAIKVISLSEGEEGYEEIRGEIEMLQQCNHPNVVRYLASYQGEEYLWIVMEYCGGGSVADLMSVTDDPLEECQIAYVCREALKGLDYLHSIFKVHRDIKGGNILLTEQGDVKLGDFGVAAQLTRTMSKRNTFIGTPHWMAPEVIQESRYDGKGVPPRSSVHPMRVLFMISIEPAPMLEDKEKWSLYFHDFVAKCLTKEPRLRPPASEMLKHKFFEKWKIGSAAMLPKLEKARQARALMALQVQTLPAEEDEELDSKLNDEYGDTVPSRPQNIRVEGDDLSSHGTTRKLHKVEDVDTSEGNFGTFIVHGDELHKAMQDADSAVSVSALTSGTGGRLADSGIESQNQKVGITNSVSFRGSSATTNTIKSSLPYASNSTEQSLKTKGTYRAQAGIGGDISNSIFKNETVSRKAFALQDKLWSIYAAGNTVPIPFLRATDISPIALLSDNVLGGIQQDTGGTRTVEALQELFSGDGQSKKGRRGLNEQMPLPPSIYQRLTSSSTLMNLAQALAYHKMCYEDMPLQELQATQEQLTIQNLSDTLRTILRL 812
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g0470 812 SUPERFAMILY Protein kinase-like (PK-like) 239 482 IPR011009 -
Aed11g0470 812 MobiDBLite consensus disorder prediction 176 190 - -
Aed11g0470 812 Pfam Protein kinase domain 242 417 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed11g0470 812 MobiDBLite consensus disorder prediction 1 17 - -
Aed11g0470 812 MobiDBLite consensus disorder prediction 221 235 - -
Aed11g0470 812 PANTHER SERINE/THREONINE-PROTEIN KINASE TAO 191 802 - -
Aed11g0470 812 MobiDBLite consensus disorder prediction 94 108 - -
Aed11g0470 812 Gene3D Transferase(Phosphotransferase) domain 1 238 519 - -
Aed11g0470 812 PANTHER SERINE/THREONINE-PROTEIN KINASE TAO 191 802 - -
Aed11g0470 812 MobiDBLite consensus disorder prediction 127 141 - -
Aed11g0470 812 SMART serkin_6 242 481 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed11g0470 812 ProSiteProfiles Protein kinase domain profile. 242 481 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed11g0470 812 MobiDBLite consensus disorder prediction 1 237 - -
Aed11g0470 812 ProSitePatterns Protein kinases ATP-binding region signature. 248 271 IPR017441 GO:0005524
Aed11g0470 812 MobiDBLite consensus disorder prediction 21 41 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g0470 Aed-Chr11 4072546 4083296 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed11g0470 7 812 MAP Kinase Kinase Kinase Kinase AT1G69220 57.851 0.0 809
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE20-Pl Aed11g0470 Pkinase 1.6e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed11g0470 - - gmx:100804995 1281.93
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed11g0470 11 4072546 4083296 Aed11g0470 11 4072546 4083296 ECH