Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g0456 ATGTATAATGCAATTGCCATGGGCGATGAAACACATGACCACTATTATTCTTCCAGCCTACCTGAGTCTTCTTTATCTCTTGATGGTGGTGGGAGGTCTTTTTTCAATGGGCAAATCAATCGTGGGACTGCTATATCAGGCCTGAAGAAGAGAAGTCATGGAAGTCGCTCTTGGATTAAAATTGATCAGGATGGGAACTTTCAGACTGTGATACTTGACAAGGCAACTATAATGAGAGATTGTTCTTTGCCTTCTAGAGATCTCCGGCTATTGGATCCGATGTTTATTTATCCTTCTACAATATTAGGACGGGAGAAGGCTATTGTAGTCAACCTTGAGCAAATCCGGTGCATAATCACTGCTGACGAGGTCATCCTAATGAATTCATTGGATGGTAGTGTTGGTCAGTACAGGTTAGAATTATGCAATCGGCTTCAGAATGAAAAAGCAGATGATTTACCCTTTGAATTTAGAGCACTGGAGTTGGCTCTAGAATTGACATGCACATCTTTAGAAGCTCAGGTAAACGAACTGGAAATGGAAATATATCCTGTGCTAGATGAACTAGCCACATCTATCAGTACTCTCAACCTGGAACGTGTTAGAAGATTTAAAGGTCACCTGCTTGCTTTGACTCAACGAGTTCAGAAGGTTCGTGATGAAATAGAACATCTCATGGATGATGATGGTGACATGGCTGAGATGTGCCTAACTGAGAAAAAGAGAAGATCAGATACTTATGATTATAATGATTATTTTCAAACTGGTGCATCAGGGAAAGTGATTTCAAAATCGGCTCCTACTTCACCAGAGCGATCAATTAGTGGAGTCCAGATGTTGCAAAGGGCTTTCAGCAGCATTGGAAATTCTAGTAAACATGGTAGTTCAATTGGTTCGTCTGATGATGCAGAAAGGATTGAGCCACTGGAAATGTTGCTTGAAGCATACTTTATTGTCATTGATAATACTCTTAACACAATATTGTCGCTCAAAGAATACATTGACGACACAGAAGATTTTATCAACATAAAATTGGGAAATATTCAAAACCAGCTAATACAGTTTGAGTTGCTTCTTACAGCTGCCACATTGGTAGCTGCAGTATTTGCTGCTGTAGCAGGTGTATTTGGAATGAACTTTGAAACCACAGTTTTTGACTATCCATCTGGATTCAATTGGGTTTTGGTAATTACTGGAATTGTTTGTGTAGTATTGTATTTTGCCCTCCTATCCTATTTTAGGTACAAGAAAGTGCTTGCAGCTTAA 1266 0.3942 MYNAIAMGDETHDHYYSSSLPESSLSLDGGGRSFFNGQINRGTAISGLKKRSHGSRSWIKIDQDGNFQTVILDKATIMRDCSLPSRDLRLLDPMFIYPSTILGREKAIVVNLEQIRCIITADEVILMNSLDGSVGQYRLELCNRLQNEKADDLPFEFRALELALELTCTSLEAQVNELEMEIYPVLDELATSISTLNLERVRRFKGHLLALTQRVQKVRDEIEHLMDDDGDMAEMCLTEKKRRSDTYDYNDYFQTGASGKVISKSAPTSPERSISGVQMLQRAFSSIGNSSKHGSSIGSSDDAERIEPLEMLLEAYFIVIDNTLNTILSLKEYIDDTEDFINIKLGNIQNQLIQFELLLTAATLVAAVFAAVAGVFGMNFETTVFDYPSGFNWVLVITGIVCVVLYFALLSYFRYKKVLAA 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g0456 421 PANTHER MAGNESIUM TRANSPORTER MRS2-5 9 420 - -
Aed11g0456 421 Coils Coil 208 228 - -
Aed11g0456 421 Pfam CorA-like Mg2+ transporter protein 313 409 IPR002523 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Aed11g0456 421 Coils Coil 419 421 - -
Aed11g0456 421 Gene3D - 44 129 - -
Aed11g0456 421 Gene3D Magnesium transport protein CorA, transmembrane region 359 418 - -
Aed11g0456 421 SUPERFAMILY Magnesium transport protein CorA, transmembrane region 358 409 IPR045863 -
Aed11g0456 421 CDD Mrs2_Mfm1p-like 58 418 IPR039204 -
Aed11g0456 421 Coils Coil 161 181 - -
Aed11g0456 421 Gene3D Magnesium transport protein CorA, transmembrane region 133 352 - -
Aed11g0456 421 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 9 420 IPR039204 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g0456 Aed-Chr11 3981760 3987279 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed11g0456 7 419 MRS2 Gene Family AT2G03620 64.218 1.41e-175 495
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed11g0456 K16075 - gmx:100803935 701.819