Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g0449 ATGAACAACATGTTTTCTTCTCTGTCTATTGGTTCCTCTGCTGCATTGCCTCTAAGATGCACCTCCAAGCTCACTTCTTTCAGGGCTGTTGCCGTTGCCGCCGATGCTTTCCCTTCGTTTCTTCCCAGAGAAATTCACACCATTCAAGACCCTATTGCCAGAAAATTCGCCTTGAGGATTCAGAGGCTACCGGTGCCTGTTAGGTTCTCAGAACATCCCATCATGAGTAGTTGTGTGAAGCCACTGGTGCAGAGCAAGGAAACCCCTGTTGTTCTTGTACATGGTTTTGACAGCTCATGTTTAGAATGGAGATATGTATTACCATTGCTTGAGGAATCTGGTATTGAGACCTGGGCCATTGACATTCTTGGTTGGGGTTTCTCTGATTTAGAAAAACTTCCTCCATGTGATGTGGTATCCAAGCGTGATCACTTGTACCAGTTTTGGAAGTCCTACATCAAAAGGCCAATGATATTGGTTGGACCAAGCCTTGGCTCTGCTGTTGCCATTGACTTTGCAGTCAATTATCCCGAAGCTGTGGAGAAGCTTATTCTGATTGGTGCTAGTGTATATGCAGAGGGTACTGGAAAGCTAGCAACCTTACCCAAAGCGGTAGCATATGCCGGGGTTAATTTATTGAAGAGCGTTCCATTACGCTTATATGCCACCTATCTGACCTTCACAAACATTTCCTTCAGCAACAGCCTTGATTGGACTAATGTAGGCCGCTTGCATTGTTTATTGCCGTGGTGGGATGATGCTACTGTGAATTTTATGACAAGTGGTGGTTACAATGTTGTTCCTTTGATAGGAAAGGTAAAACAGAAAACACTGATAATATGGGGTGAAAACGACCGCATCATCAACAATAAGTTTGCAGTGCGACTCCAGTGTGAGCTACCTGATGCAATTATACGCCAAATACCCAAATGTGGACATCTTCCTCATCTGGAAAGACCAGATTCTACTATCAAATTAATTGTTGAATTTGTGCAAAGTGAGAGTAAGAAATTAAGTCAATATGTGTTGCACAAGTATGAAGATTGA 1047 0.4317 MNNMFSSLSIGSSAALPLRCTSKLTSFRAVAVAADAFPSFLPREIHTIQDPIARKFALRIQRLPVPVRFSEHPIMSSCVKPLVQSKETPVVLVHGFDSSCLEWRYVLPLLEESGIETWAIDILGWGFSDLEKLPPCDVVSKRDHLYQFWKSYIKRPMILVGPSLGSAVAIDFAVNYPEAVEKLILIGASVYAEGTGKLATLPKAVAYAGVNLLKSVPLRLYATYLTFTNISFSNSLDWTNVGRLHCLLPWWDDATVNFMTSGGYNVVPLIGKVKQKTLIIWGENDRIINNKFAVRLQCELPDAIIRQIPKCGHLPHLERPDSTIKLIVEFVQSESKKLSQYVLHKYED 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g0449 348 PRINTS Alpha/beta hydrolase fold signature 173 186 IPR000073 -
Aed11g0449 348 PRINTS Alpha/beta hydrolase fold signature 114 129 IPR000073 -
Aed11g0449 348 PRINTS Alpha/beta hydrolase fold signature 159 172 IPR000073 -
Aed11g0449 348 PRINTS Alpha/beta hydrolase fold signature 277 291 IPR000073 -
Aed11g0449 348 PRINTS Epoxide hydrolase signature 308 330 IPR000639 GO:0003824
Aed11g0449 348 PRINTS Epoxide hydrolase signature 114 129 IPR000639 GO:0003824
Aed11g0449 348 PRINTS Epoxide hydrolase signature 173 186 IPR000639 GO:0003824
Aed11g0449 348 PRINTS Epoxide hydrolase signature 94 112 IPR000639 GO:0003824
Aed11g0449 348 PANTHER HYDROLASE 6 342 - -
Aed11g0449 348 Pfam Alpha/beta hydrolase family 90 323 IPR000073 -
Aed11g0449 348 Gene3D alpha/beta hydrolase 79 344 IPR029058 -
Aed11g0449 348 SUPERFAMILY alpha/beta-Hydrolases 88 332 IPR029058 -
Aed11g0449 348 PANTHER ALPHA/BETA FOLD HYDROLASE 6 342 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g0449 Aed-Chr11 3917366 3923259 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed11g0449 89 331 Acyl Lipid Metabolism Gene Families AT3G10840 25.316 1.50e-14 72.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed11g0449 - - gmx:100800197 630.172
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed11g0449 11 3917366 3923259 Aed11g0449 11 3917366 3923259 ECH
Aed11g0449 11 3917366 3923259 Aed11g0449 11 3917366 3923259 PCT