Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g0438 ATGGAAGACAAGGACAGAGCAGCAGCCTCCGATCCCGCAGCAGCGGCTGAGTTCGCCGGCGACACGAGTTGGACACTCGCCGCCGATTACTCCGACGGCGCGTACCTCTTCGCCGGCGACAGAGAGCGGAGCATACTCAGGGAATTCGGGCGGAACCTCGAACCGGACCACCAGTCGAACCGGATCGGCACCGCCGACGTCGGATTGTGGATGCCGGTTCAGTCCTCTCTGACCGGTCCGATCGAACCGGCCGCTGCGGTGTCGTCCAGCTCCAGCGAGGATCCGCCGGAGAAATCCACCGTCTCCGACGAGAAACCGCCTGAGATACCGAGTAAAGGTAAAAAGAAGGGGCAAAAGCGAATACGGCAGCCACGGTTTGCATTTATGACCAAGAGTGAAGTTGATCATCTTGAGGATGGCTACAGATGGCGGAAGTATGGTCAGAAAGCAGTTAAAAATAGCCCTTTCCCTAGTTCTAGTAGTATTTCTCAGGCATGCCAAACACAGGATGAAGGTGGAGGAGGAGGATCCAGTACCAGTACTGCTATGATGATGCCGCCAGCTGATCATGCAATATCGTCACAGCCTCCCACGGATGATGGGTTGCTTGGAGATATTGTACCCCCGGGAATGCGCATCAGATAA 645 0.5612 MEDKDRAAASDPAAAAEFAGDTSWTLAADYSDGAYLFAGDRERSILREFGRNLEPDHQSNRIGTADVGLWMPVQSSLTGPIEPAAAVSSSSSEDPPEKSTVSDEKPPEIPSKGKKKGQKRIRQPRFAFMTKSEVDHLEDGYRWRKYGQKAVKNSPFPSSSSISQACQTQDEGGGGGSSTSTAMMMPPADHAISSQPPTDDGLLGDIVPPGMRIR 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g0438 214 MobiDBLite consensus disorder prediction 80 128 - -
Aed11g0438 214 SMART WRKY_cls 137 187 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aed11g0438 214 Pfam WRKY DNA -binding domain 138 159 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aed11g0438 214 MobiDBLite consensus disorder prediction 1 20 - -
Aed11g0438 214 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 14 160 IPR044810 GO:0003700
Aed11g0438 214 MobiDBLite consensus disorder prediction 97 114 - -
Aed11g0438 214 MobiDBLite consensus disorder prediction 81 96 - -
Aed11g0438 214 SUPERFAMILY WRKY DNA-binding domain 129 159 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aed11g0438 214 ProSiteProfiles WRKY domain profile. 132 159 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aed11g0438 214 PANTHER WRKY TRANSCRIPTION FACTOR 57-RELATED 14 160 - -
Aed11g0438 214 MobiDBLite consensus disorder prediction 152 184 - -
Aed11g0438 214 Gene3D WRKY domain 124 172 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aed11g0438 214 MobiDBLite consensus disorder prediction 152 214 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g0438 Aed-Chr11 3808611 3811492 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed11g0438 86 159 WRKY Transcription Factor Family AT1G69310 78.947 3.29e-33 119
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Aed11g0438 WRKY 4.2e-07 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed11g0438 - - gmx:100127427 238.81
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed11g0438 11 3808611 3811492 Aed11g0438 11 3808611 3811492 ECH