Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g0410 ATGTCAGACGAGGAACACCACTTCGAGTCAAAGGCTGATGCTGGAGCATCAAAGACATATCCTCAGCAAGCTGGAACCATCCGCAAAAACGGTTACATTGTCATCAAAAACAGGCCATGCAAGGTTGTGGAGGTTTCAACTTCCAAAACTGGCAAGCATGGACATGCAAAGTGTCACTTTGTTGCTATTGACATCTTCACTGGCAAAAAGCTTGAGGATATTGTCCCATCTTCCCATAACTGTGATGTTCCTCATGTTAATCGCATTGACTACCAGCTCATTGACATCTCAGAGGATGGATTTGTGAGTCTGCTGACTGATAGTGGTGGTACCAAGGATGACCTTAGGCTTCCAACCGATGAAAATCTGCTTACGCAGGGAAAAGTAAAATTTGATCCCTGA 402 0.4453 MSDEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHFVAIDIFTGKKLEDIVPSSHNCDVPHVNRIDYQLIDISEDGFVSLLTDSGGTKDDLRLPTDENLLTQGKVKFDP 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g0410 133 ProSitePatterns Eukaryotic initiation factor 5A hypusine signature. 50 57 IPR019769 GO:0003723|GO:0003746|GO:0043022|GO:0045901|GO:0045905
Aed11g0410 133 Gene3D - 1 85 IPR014722 -
Aed11g0410 133 PANTHER BNAA07G09420D PROTEIN 1 123 - -
Aed11g0410 133 PIRSF Transl_init_eIF5A 1 132 IPR001884 GO:0003723|GO:0003746|GO:0043022|GO:0045901
Aed11g0410 133 SUPERFAMILY Translation proteins SH3-like domain 15 93 IPR008991 -
Aed11g0410 133 MobiDBLite consensus disorder prediction 1 21 - -
Aed11g0410 133 Gene3D - 86 133 IPR012340 -
Aed11g0410 133 SUPERFAMILY Nucleic acid-binding proteins 86 131 IPR012340 -
Aed11g0410 133 SMART eIF_5a_2 85 130 IPR020189 GO:0003723|GO:0003746|GO:0043022|GO:0045901|GO:0045905
Aed11g0410 133 TIGRFAM eIF_5A: translation elongation factor IF5A 17 121 IPR001884 GO:0003723|GO:0003746|GO:0043022|GO:0045901
Aed11g0410 133 PANTHER TRANSLATION INITIATION FACTOR 5A FAMILY MEMBER 1 123 IPR001884 GO:0003723|GO:0003746|GO:0043022|GO:0045901
Aed11g0410 133 Pfam Eukaryotic elongation factor 5A hypusine, DNA-binding OB fold 85 132 IPR020189 GO:0003723|GO:0003746|GO:0043022|GO:0045901|GO:0045905
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g0410 Aed-Chr11 3518710 3520756 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed11g0410 1 132 Eukaryotic Initiation Factors Gene Family AT1G13950 88.636 1.04e-83 240
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed11g0410 K03263 - gmx:100306157 256.529