Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g0406 ATGGCTGGCGGCGGAAGTGGGGAGCGGCCGCCGTGGAAGGAGGCTGCGCCGCCGCGACCCACCATCAGTCTGCCACCGCGGTCTGGCTCTGGCATGGAGACCCTTTTCATCGGAGGGTTCAGCCCTGGTCCCATGACTCTGCTTTCTAGCTTTTTGGGTGATGGTGATGATGGCAAGTCTTTCTCTCAGCTCCTCGCCGGAGCTATGGTTTCTCCGGTGGACGGAGCTATCGCCGGCGTGATGGACTCACCTGGCCTCTTCTCACCACCTTCTCAGGTGTCTTTTGGAATGACACACCAGCAGGCCCTAGCACAGGTCCCAGCTGCTTCACAAGCCAACTCAAACATGCATATCCAATCTGTATCAGTATCAGCAGCAGCTACCTCATCGTCACAGCCTCCTGCAGCTACTTCCAACACAACACAACAGCTGATTCCACCCTTAAATGTAGACTCTTGGGCCACAATGGCCGAAACCGCTGATGATCATCCTTACTCTGAACAAAGACTGCAGCAATCTTCATCGTTGAATGTTGACAAGCCCGCGGACGATGGCTACAACTGGAGGAAGTATGGCCAGAAACAGGTGAAGGGTAGCGAGTTTCCTCGAAGCTACTACAAGTGCACGCATCCAAACTGTCCTGTCAAGAAGAAGGTCGAGCGCTCACTTGAGGGTCATGTCACTGCAATCATTTACAAAGGAGAACACAACCATCAACATCCTCATCCTAACAAGCGCTCGAAAGACACTACCATGACTTCAAATGAAAATTCAAATATGCAAGGGAATGCAGATTCAGTGTCTAAGATGGATTCAGAGTCAAGTCAAGCAACGGCTGATCGTCTATCAGGAACAAGTGACAGCGAGGAAGTAGGTGATCACGAAACTGATGTGGATGAGAAAAATGCTGAGCCTGACAACAAGAGGAGAAAAGCAGAAGTCACTATGCACTCAGATCCAGCTTCTTCGCATAGGACTGTCACTGAGCCTAGAATCATTGTGCAAACAACAAGTGAAGTTGATCTCTTAGATGATGGGTATAGATGGCGAAAATACGGGCAGAAAGTTGTCAAAGGCAACCCTTATCCTAGGTGA 1095 0.5041 MAGGGSGERPPWKEAAPPRPTISLPPRSGSGMETLFIGGFSPGPMTLLSSFLGDGDDGKSFSQLLAGAMVSPVDGAIAGVMDSPGLFSPPSQVSFGMTHQQALAQVPAASQANSNMHIQSVSVSAAATSSSQPPAATSNTTQQLIPPLNVDSWATMAETADDHPYSEQRLQQSSSLNVDKPADDGYNWRKYGQKQVKGSEFPRSYYKCTHPNCPVKKKVERSLEGHVTAIIYKGEHNHQHPHPNKRSKDTTMTSNENSNMQGNADSVSKMDSESSQATADRLSGTSDSEEVGDHETDVDEKNAEPDNKRRKAEVTMHSDPASSHRTVTEPRIIVQTTSEVDLLDDGYRWRKYGQKVVKGNPYPR 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g0406 364 MobiDBLite consensus disorder prediction 1 30 - -
Aed11g0406 364 Pfam WRKY DNA -binding domain 344 364 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aed11g0406 364 Pfam WRKY DNA -binding domain 183 239 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aed11g0406 364 Gene3D WRKY domain 168 242 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aed11g0406 364 PANTHER WRKY TRANSCRIPTION FACTOR 58-RELATED 14 364 - -
Aed11g0406 364 SUPERFAMILY WRKY DNA-binding domain 180 241 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aed11g0406 364 Gene3D WRKY domain 330 364 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aed11g0406 364 ProSiteProfiles WRKY domain profile. 183 241 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aed11g0406 364 MobiDBLite consensus disorder prediction 232 249 - -
Aed11g0406 364 MobiDBLite consensus disorder prediction 161 193 - -
Aed11g0406 364 SMART WRKY_cls 182 240 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aed11g0406 364 MobiDBLite consensus disorder prediction 232 332 - -
Aed11g0406 364 MobiDBLite consensus disorder prediction 250 285 - -
Aed11g0406 364 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 14 364 IPR044810 GO:0003700
Aed11g0406 364 MobiDBLite consensus disorder prediction 166 180 - -
Aed11g0406 364 ProSiteProfiles WRKY domain profile. 338 364 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aed11g0406 364 SUPERFAMILY WRKY DNA-binding domain 335 364 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aed11g0406 364 MobiDBLite consensus disorder prediction 286 318 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g0406 Aed-Chr11 3460783 3465006 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed11g0406 19 364 WRKY Transcription Factor Family AT2G03340 46.778 4.60e-106 319
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Aed11g0406 WRKY 7.7e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed11g0406 - - gmx:100127369 588.571