Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g0401 ATGGAAGAGACAGAGGAGTCAGCCAATGCTAACCAGAAATTCACCACCAAAAGAAGAAGCTTCAGAAATGGAGGCAACTCTCATGAGCATCATCATTACCACCACCACCACCACCACCATCACCACCATCATCACTACCAGCACCAGCTGCTACAATACTCAACTCAGCTTGGTTTCTGCAACAACCAGAACAACAAGTTTCAGAGATACTACCCTGCTCTTCTTCCACTACCTTCTCATATACCTCTTCAGCAACTTCCTCTGACTCCTCCCTTCCCTCAGAACCACACCATCAAATCAAAAACCCATTTGTACAAACCACCATGCATGCTCAATAGCTCCCCCTCCTCAGATTACAACCTCTCTCAACCACTGCTTGATCCTGCTCCAAAGGAACTTCAGCAGCAAACTAAAGAGGCATCCTTTAAAGGAGATGATGGGAAGAAACTCATTCCAGCAAGGAAGTCACAAGCAGTAACTGTTGCAAGGAGGCCAGACTCTGGTGGCAAAGAAGGTTCTGTGATCACTCTTCTTGCCAACCACTTCTTGGTGCAATTTGATCCCTCGCAAAAGATATATCACTACAATGTTGAAATCACTCCTCATCCCTCCAAGGATGTTGCCAGAGCAATCAAGCAGAAGTTGGTAGATAACAATTCCGCAGTCCTCTCGGGTGCTACACCGGCATATGATGGAAGAAAGAATCTTTATAGTCCAGTCGAGTTCCAAAATGACAAGCTTGAGTTCTACATAAGCCTCCCAATCCCCACTAGCAAGTTGAATTCATCACATTATGGAGGAGAAATGTCTGACTTGAAAGACAAGCAAGAACAGCTTAAGCTTTTCAGGATAAATATCAAGTTGGTGTCAAAGATCAATGGGAAGGAGCTGAGTAACTACTTGAGCAAAGAGGGTGATGATTGGATTCCACTTCCACAAGACTATCTACATGCTTTGGATGTGGTTCTTAGGGAAAGTCCAACTGAGAAATGCATACCTGTAGGGAGGTCATTCTATTCGACTTCGATGGGACGAAGCAAAGACATTGGTGGAGGAGCTGTTGGATTGAGAGGCTTCTTTCAGAGTCTTAGACCAACACAGCAAGGACTTGCTCTCAATGTGAATTTCTCAGTGACTGCATTCCATGAGAGCATAGGAGTGATTCCATATTTGCAGAAACGCCTCGAGTTTCTTCGAGACCTTTCTCAGAGGAAGACGGCTCAGTTAACTGGTGAAGAGAGGAAGGAAGTGGAGAAGGCATTGAAGAACATCAGGGTCTTTGTTTGCCATAGAGAAACCGTTCAGCGATACCGCGTCTATGGCTTGACTGAGGAGGCTACTGAGAACCTTTGGTTTGCTGACAGAGATGGAAAGAATCTAAGGCTGGTTAATTACTTTAAAGATCACTATAACTATGACATACAATTCAGAAAACTGCCATGCTTGCAAATTAGTAGGAGTAAGCCTTGTTATCTCCCTATGGAGCTTTGTGTGATCTGTGAAGGCCAGAAGTTTCTTGGGAAACTGTCTGATGATCAAACAGCAAGAATACTCAAGATGGGCTGCCAAAAACCGGGGGAACGAAAAACCATTATTGAAGGAGTCATGAGAGGAACTGTTGGGCCTACCAGTGGTGATCAGGAAAAAGAATTCAAACTCCAAGTATCAAGAGAAATGACAAAGTTGACTGGCAGAATTCTTCACCCTCCCAAACTAAAGCTTGGGGATGGAGGTAATGTGAGAAACCTAACTCCTTCGCGTCACGACTGCCAATGGAACCTTCTTGACGGCCATGTCTTTGAAGGAACCACTATTGAAAGGTGGGCACTGATTAGTTTTGGGGGCACACCTGAGCAGAAGTCCAATGTCCCCAGATTCATAAACCAGTTATCTCAAAGGTGTGAACAATTAGGCATTTTTCTCAACAAGAAAACAGTTATTAGTCCTCAGTTTGAGTCAAGCCAGATTCTTAACAATGTCACCCTTTTGGAATCTAAGCTCAAGAGAATCCAGACTTCTGCCTCAAACAATCTCCAGCTTCTCATTTGCATAATGGAGAGAAAACACAAAGGGTATGCAGACTTGAAACGAATCGCCGAGACAAGTGTTGGTGTTGTGAGCCAATGCTGCCTCTACACCAATCTCAGCAAGTTGAGTTCACAGTTTTTGGCTAACTTGGCCCTCAAAATCAATGCCAAAGTTGGTGGGTGCACGGTTGCCTTGTACAACTCGTTGCCTTTGCAGCTACCGCGCCTCTTTCACATCGATGAGCCGGTGATATTCATGGGAGCAGATGTGACACATCCTCACCCTCTTGATGATTTCAGTCCATCTGTTGCTGCTGTTGTTGGTAGTATGAATTGGCCAACAGCCAACAAGTACATTTCAAGAATAAGGTCTCAAACACATAGGCAAGAGATCATCCATGATCTCGGTGCAATGGTGTGTGAATTGCTTGATGATTTCTACCAAGAGGTAGAGAAACTCCCCAACAGAATCATTTTCTTCAGAGACGGCGTTAGTGAGACTCAGTTCTACAAAGTTCTTGAAGAGGAACTTCAATCCATCAAGAGTGCATGCACAAAGTTTCCTGATTACAAACCTACCATAACTTTTGCAGTTGTGCAAAAGAGGCATCACACAAGGTTGTTTCCCTTTGAAACTGACCAGTCTTCAACTCATCAAAACCACTCTCCATATGAAAACATTCCACCAGGGACTGTGGTGGATTCTGTGATCACTCATCCAAAGGAATTTGACTTCTACCTTTGCAGCCATTGGGGTGTGAAAGGAACAAGTAGGCCAACACACTACCATGTGTTGTGGGATGAAAACCACTTCACTTCTGATGAACTTCAGAAACTTGTTTACAACTTGTGCTACACTTTTGTTAGGTGCACCAAGCCAATTTCTTTGGTGCCTCCTGCATATTATGCACATTTGGCTGCATATAGAGGCAGACTCTACCTTGAGAGATCAGAGTCCTTAGGTTTGTTCAGAAGTACTTCCACACTATCCAGAGCTGCTCCTCCAAAGACAGCACCATTACCTAAACTTAGTGAAAACATCAAGAAGCTCATGTTCTATTGCTAG 3093 0.441 MEETEESANANQKFTTKRRSFRNGGNSHEHHHYHHHHHHHHHHHHYQHQLLQYSTQLGFCNNQNNKFQRYYPALLPLPSHIPLQQLPLTPPFPQNHTIKSKTHLYKPPCMLNSSPSSDYNLSQPLLDPAPKELQQQTKEASFKGDDGKKLIPARKSQAVTVARRPDSGGKEGSVITLLANHFLVQFDPSQKIYHYNVEITPHPSKDVARAIKQKLVDNNSAVLSGATPAYDGRKNLYSPVEFQNDKLEFYISLPIPTSKLNSSHYGGEMSDLKDKQEQLKLFRINIKLVSKINGKELSNYLSKEGDDWIPLPQDYLHALDVVLRESPTEKCIPVGRSFYSTSMGRSKDIGGGAVGLRGFFQSLRPTQQGLALNVNFSVTAFHESIGVIPYLQKRLEFLRDLSQRKTAQLTGEERKEVEKALKNIRVFVCHRETVQRYRVYGLTEEATENLWFADRDGKNLRLVNYFKDHYNYDIQFRKLPCLQISRSKPCYLPMELCVICEGQKFLGKLSDDQTARILKMGCQKPGERKTIIEGVMRGTVGPTSGDQEKEFKLQVSREMTKLTGRILHPPKLKLGDGGNVRNLTPSRHDCQWNLLDGHVFEGTTIERWALISFGGTPEQKSNVPRFINQLSQRCEQLGIFLNKKTVISPQFESSQILNNVTLLESKLKRIQTSASNNLQLLICIMERKHKGYADLKRIAETSVGVVSQCCLYTNLSKLSSQFLANLALKINAKVGGCTVALYNSLPLQLPRLFHIDEPVIFMGADVTHPHPLDDFSPSVAAVVGSMNWPTANKYISRIRSQTHRQEIIHDLGAMVCELLDDFYQEVEKLPNRIIFFRDGVSETQFYKVLEEELQSIKSACTKFPDYKPTITFAVVQKRHHTRLFPFETDQSSTHQNHSPYENIPPGTVVDSVITHPKEFDFYLCSHWGVKGTSRPTHYHVLWDENHFTSDELQKLVYNLCYTFVRCTKPISLVPPAYYAHLAAYRGRLYLERSESLGLFRSTSTLSRAAPPKTAPLPKLSENIKKLMFYC 1030
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g0401 1030 SUPERFAMILY PAZ domain 379 537 IPR036085 GO:0005515
Aed11g0401 1030 Gene3D paz domain 378 505 - -
Aed11g0401 1030 ProSiteProfiles PAZ domain profile. 392 501 IPR003100 GO:0005515
Aed11g0401 1030 Pfam N-terminal domain of argonaute 175 323 IPR032474 -
Aed11g0401 1030 MobiDBLite consensus disorder prediction 1 48 - -
Aed11g0401 1030 PANTHER PROTEIN ARGONAUTE 7 116 1029 - -
Aed11g0401 1030 SMART DUF1785_2 332 384 IPR014811 -
Aed11g0401 1030 SMART Piwi_a_2 680 991 IPR003165 GO:0003676
Aed11g0401 1030 ProSiteProfiles Piwi domain profile. 680 991 IPR003165 GO:0003676
Aed11g0401 1030 CDD PAZ_argonaute_like 388 500 - -
Aed11g0401 1030 SUPERFAMILY Ribonuclease H-like 666 991 IPR012337 -
Aed11g0401 1030 Gene3D - 566 742 - -
Aed11g0401 1030 SMART PAZ_2_a_3 392 523 IPR003100 GO:0005515
Aed11g0401 1030 Pfam PAZ domain 395 517 IPR003100 GO:0005515
Aed11g0401 1030 Pfam Piwi domain 681 988 IPR003165 GO:0003676
Aed11g0401 1030 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 116 1029 - -
Aed11g0401 1030 Pfam Argonaute linker 1 domain 333 382 IPR014811 -
Aed11g0401 1030 Gene3D - 752 1030 IPR036397 GO:0003676
Aed11g0401 1030 MobiDBLite consensus disorder prediction 28 48 - -
Aed11g0401 1030 CDD Piwi_ago-like 549 990 IPR045246 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g0401 Aed-Chr11 3415656 3421217 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed11g0401 113 1030 Eukaryotic Initiation Factors Gene Family AT1G48410 40.664 0.0 644
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed11g0401 K11593 - gmx:100797755 1885.92