Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g0396 ATGAGCAGCGGCGGAGGATCGTCGGACACGGCGGCGGAGGCGAAGGAGAAGGAGAAGGCGCGCGTGAGTCGAACGTCGCTGATTCTGTGGCACGCGCACCAAAACGACGCCGCGTCGGTGCGGAAGCTTCTGGAGGAGGATCCGTCGCTGGTGAAGGCGAGGGATTACGACAGCCGCACGCCGCTGCACGTGGCGTCGCTCCATGGATGGGTCGAGGTTGCCAATTGCTTGATCGAATTCGGCGCCGATGTGAACGCTCAGGATCGTTGGAAAAACACTCCTCTGGCTGATGCAGAAGGAGCTAAAAGAACTCCAATGATTGAGCTTTTGAAGTCACATGGTGGATTGTCTTATGGACAAACTGGAAGCCATTGGGAACAGAGCCCTGTTCTTCCCCCATTGCCTAACAAGTGTGATTGGGAAGTTGATCCTTCTGAGCTGGACTTCTCCAATTCAGTTTGCATTGGAAAGGGATCTTTTGGCGAGATTTTAAAAGCCTATTGGCGTGGAACACCTGTTGCTGTCAAACGTATTCTTCCATCTCTGTCAGATGATAGATTGGTGATCCAGGACTTCCGGCACGAGGTTAATTTACTTGTAAAGCTTCGACACCCTAATGTTGTTCAATTTCTTGGAGCTGTTACTGACAGGAAGCCCCTTATGTTAATTACTGAGTATCTGAGAGGAGGTGATCTTCATAAGTACCTCAAGGACAAAGGTTCACTTAGTCCTTCAACAGCCATCAACTTTGGCTTGGATATTGCTAGAGGGATGGCCTATCTTCACAATGAACCAAATGTTATCATTCATCGAGACCTAAAGCCAAGGAATGTTCTTTTAGCCAACTCCGCTGCTGACCATTTAAAAGTTGGTGATTTTGGACTTAGTAAGCTCATCAAGGTCAAAAGTGCTCATGACGTATACAAGATGACGGGTGAAACTGGAAGCTACCGCTACATGGCTCCTGAAGTTTTCAAACACCGGAGATATGAGAAGAAGGTTGATGTGTTCTCTTTTGCAATGATTCTGTTTGAGATGCTTGAAGGTGAACCCCCCTTTGCAAACTATGAACCTTATGATGGAGCCAAATATGTGGCAGAAGGGCACAGGCCTTCTTTTAGGGCGAAGGGTTATACCCCTGAACTGCGAGAGTTAACAGAGCAGTGTTGGGCTGCTGACACGAATCAAAGACCTTCATTCATAGAGATCCTTAAACGGCTCGATAAGATCAAGGAAGGTTTGCCTTCAGATAATCTTTGGCACTTGTTCACTTCATGA 1278 0.4781 MSSGGGSSDTAAEAKEKEKARVSRTSLILWHAHQNDAASVRKLLEEDPSLVKARDYDSRTPLHVASLHGWVEVANCLIEFGADVNAQDRWKNTPLADAEGAKRTPMIELLKSHGGLSYGQTGSHWEQSPVLPPLPNKCDWEVDPSELDFSNSVCIGKGSFGEILKAYWRGTPVAVKRILPSLSDDRLVIQDFRHEVNLLVKLRHPNVVQFLGAVTDRKPLMLITEYLRGGDLHKYLKDKGSLSPSTAINFGLDIARGMAYLHNEPNVIIHRDLKPRNVLLANSAADHLKVGDFGLSKLIKVKSAHDVYKMTGETGSYRYMAPEVFKHRRYEKKVDVFSFAMILFEMLEGEPPFANYEPYDGAKYVAEGHRPSFRAKGYTPELRELTEQCWAADTNQRPSFIEILKRLDKIKEGLPSDNLWHLFTS 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g0396 425 SMART ANK_2a 57 86 IPR002110 GO:0005515
Aed11g0396 425 Pfam Ankyrin repeats (many copies) 43 95 IPR002110 GO:0005515
Aed11g0396 425 Gene3D - 5 125 IPR036770 -
Aed11g0396 425 SMART serkin_6 149 411 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed11g0396 425 ProSiteProfiles Ankyrin repeat region circular profile. 57 89 - -
Aed11g0396 425 SUPERFAMILY Ankyrin repeat 28 115 IPR036770 -
Aed11g0396 425 MobiDBLite consensus disorder prediction 1 20 - -
Aed11g0396 425 SUPERFAMILY Protein kinase-like (PK-like) 148 417 IPR011009 -
Aed11g0396 425 PANTHER SERINE/THREONINE-PROTEIN KINASE STY8-LIKE 10 417 - -
Aed11g0396 425 PRINTS Tyrosine kinase catalytic domain signature 262 280 IPR001245 GO:0004672|GO:0006468
Aed11g0396 425 PRINTS Tyrosine kinase catalytic domain signature 378 400 IPR001245 GO:0004672|GO:0006468
Aed11g0396 425 PRINTS Tyrosine kinase catalytic domain signature 224 237 IPR001245 GO:0004672|GO:0006468
Aed11g0396 425 Pfam Protein tyrosine and serine/threonine kinase 154 407 IPR001245 GO:0004672|GO:0006468
Aed11g0396 425 ProSitePatterns Serine/Threonine protein kinases active-site signature. 268 280 IPR008271 GO:0004672|GO:0006468
Aed11g0396 425 ProSiteProfiles Ankyrin repeat profile. 57 89 IPR002110 GO:0005515
Aed11g0396 425 PIRSF ILK 1 425 - -
Aed11g0396 425 ProSiteProfiles Protein kinase domain profile. 149 424 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed11g0396 425 CDD STKc_MAP3K-like 155 407 - -
Aed11g0396 425 Gene3D Transferase(Phosphotransferase) domain 1 229 418 - -
Aed11g0396 425 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 10 417 - -
Aed11g0396 425 Gene3D Phosphorylase Kinase; domain 1 133 228 - -
Aed11g0396 425 ProSitePatterns Protein kinases ATP-binding region signature. 155 176 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g0396 Aed-Chr11 3376881 3381884 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed11g0396 2 425 MAP Kinase Kinase Kinase AT1G14000 81.368 0.0 724
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-5 Aed11g0396 PK_Tyr_Ser-Thr 2.1e-63 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed11g0396 - - gmx:100789273 800.045