Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g0370 ATGGATCTACAAAACATGCAAAACCAAAGCATGCATTTTGTGCTGTCAACTGATTCCAAACCAAGGCTTAAATGGACTCCTGAGCTTCACCAACGGTTCATTGAGGCAACAAATCAGCTTGGAGGTGCAGATAAAGCAACTCCAAAGAGTCTTATGAGAGTGATGGGAATTCCAGGGCTCACTTTGTACCACCTGAAGAGCCATTTACAGGCATTCATTGATTCCCCTTTTAAATATAGACTTGGGAAAAGCCAAGTATTAGAAACCTGCTCTGACAACAAACAAGAAGATTACTTAGAAACCAAGAGCTGCAGTGATGGCCATTGCAGCAGGGAAATCAGTCTTGGGGCCCAGAATCATATGACTGAAAACATGCAGATTGCTCAGGCTCTCCAAATGCAAATGGAAGTGCAAAGGAAACTTTATGAACAAATTGAGGTGCAGAAACATTTGCAGCTCAGAATTGAAGCTCAAGGGAAGTATTTGCAATCAGTGTTAAAAAAGGCACAAGAAGCACTTGCTGGATACAATTCTTCCCCAGTGGGGATAGAACTCACAAAAGCAGAACTTTCTCAGCTAGTCACCATCATCAACAATGCTTGTCCAAGTTCTCCCATCTCAGAACTCACAGAAACAAGAGGGTTGAGTTTAAGCTGTGGGGAGAGGAAAAGAGACAGAGGAACCATGTGTTCACTTGAAAGTTCTTTGACATCTTCTGAAAGCTCAGGGAGAAAGGAAGAGAAACAACAACCAAAGGAAGAAATAGGGGACTTCAAAGAATTGCCATTGATGGAAACTCACACCGAGTATAAAGAATCCAATGGAGGTGGCTCAAGCAATGAGGGTAGTGGGAGGAATAAGAGAAGTGCTGCAGCAGCAACAGAATCTGATGATGGTAGTAGCTGTGTTGTTGAGCAACCATGTGGGAAAAGATGTGGCAACAAGTTGAGGAAAGCCAAGTTGTTGTCAGAAATGATGCTTGACTTGAACAGCCAGTGTCAGGGTGACATAAACTCAGCAAGTGCAAAAACATTAGATTTGAATTGCAGTTTAAACTTTTGGGAACAACCATGA 1074 0.4246 MDLQNMQNQSMHFVLSTDSKPRLKWTPELHQRFIEATNQLGGADKATPKSLMRVMGIPGLTLYHLKSHLQAFIDSPFKYRLGKSQVLETCSDNKQEDYLETKSCSDGHCSREISLGAQNHMTENMQIAQALQMQMEVQRKLYEQIEVQKHLQLRIEAQGKYLQSVLKKAQEALAGYNSSPVGIELTKAELSQLVTIINNACPSSPISELTETRGLSLSCGERKRDRGTMCSLESSLTSSESSGRKEEKQQPKEEIGDFKELPLMETHTEYKESNGGGSSNEGSGRNKRSAAAATESDDGSSCVVEQPCGKRCGNKLRKAKLLSEMMLDLNSQCQGDINSASAKTLDLNCSLNFWEQP 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g0370 357 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 5 353 IPR044848 GO:0003700
Aed11g0370 357 SUPERFAMILY Homeodomain-like 19 73 IPR009057 -
Aed11g0370 357 MobiDBLite consensus disorder prediction 228 301 - -
Aed11g0370 357 Gene3D - 19 84 - -
Aed11g0370 357 PANTHER MYB-LIKE TRANSCRIPTION FACTOR FAMILY PROTEIN 5 353 - -
Aed11g0370 357 Coils Coil 128 148 - -
Aed11g0370 357 Pfam MYB-CC type transfactor, LHEQLE motif 125 171 IPR025756 -
Aed11g0370 357 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 20 72 IPR006447 GO:0003677
Aed11g0370 357 MobiDBLite consensus disorder prediction 271 301 - -
Aed11g0370 357 MobiDBLite consensus disorder prediction 240 267 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g0370 Aed-Chr11 3126775 3129783 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed11g0370 11 212 G2-like Transcription Factor Family AT1G69580 57.143 2.81e-71 224
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Aed11g0370 Myb_CC_LHEQLE 6.8e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed11g0370 - - gmx:100787178 571.237
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed11g0370 11 3126775 3129783 Aed11g0370 11 3126775 3129783 ECH