Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g0355 ATGGGTACTAAGAGCCTCTTTATGCTTAAGTCCCACATTGATTTTGTTTGTGTGAACATGGTGTGGGCCTTTGCTTCTCTGCGAGTGTTCGTTTGCAACTATGTTCTCTATGCTTTTGGATCATTGCTCAGATACATCTTCAGGTTTTTTGATTTGGGAGATGCAAAAGGTGAGATCATTGTTCAGAAACTAGAACATGTTGAGAGGAACTGGGTTTCTGATTCTAAGATTGATGGGTTCCGAGAGGAGCTAGCAAGTTTTCTGTTTTGGAGTGAAGATTTTCATCAAGAGACAGAGGGAGAAACAGAGAGCTCTGTTTTTGTTATGAAAGTTGCTCCTGAAGGTGAGAAAAGAGATGGAGAAACAGAGTGCTCTGTTTTGATGGAGAAACAGAGTGATATTCATGAAGATGGGGAGAAAACCGATGTGCCCACAGAGAACTCTGTTTCAGAAGAGATTGAGTCTAACATCCAAGAAGATGGTATAAGTAGGTCAATAGAAGAAGAAGGATCTGTTTTTATGAATAGTGACACTGACAACCCTGTTATTCATAAAAATAGTAGGGAAGTTGAAATAGAAACAGAGGAGATTGGTTCAATGGAGACTGACTCAGGTGTTCATCAAGATGATAAAAAGATTGATGAAGATAAAACAGAGAACTCTGTTTACATGGAGAATGACTCTGATCTCCATCACAGAATTATGAAGAGGAAAGAAGAAGAAAAAGAAATGGAGGAACCTGTTTCTGCAGAGATTGATTCCGTTGTTCATGAAGAATTTAAGAAAATTGATGAAAATGAAACAGGGAGTGATGTTTTATTGGAGAAGGACCCTAGTGAACCTGTGAATGAGAATGGTAAGAAAATAGACGAAAACGAGGGCTCCGTTTTCAAGAAACAAGAGTCTAATGTTAATGGAGAAGATACAAAGAGAGAAGAAACAAATGGGCCTGTTTTTGTGGACAATAACTCTGTAACAACCACAAGTAAGTGTGAGTACTTATCGAGTAAAGATATAAGTGGGTTCATGGAGGAACCAACAACATTGAGGTTCAGTTTTCGAGAATTTTATATGGGTCCAGATGTTTCAACCGTTTCTGACAATGCATATGCCAGCACAGAAATTATTGCCGACAAGGAATTTTCAGAGTTTGGATCAGAGAAAAAGCCTGTGGCACAGGTACAAACAGAGGACTCTGTTCAAGAAGAGGCTTCAGCACCTTCTACCCATATCCCACTTCACTTGGAGAGTGAAATGTTTGGTGGATCCGATTCATCTGATGAAGATTATTTTCTTTACAATGAAAACTCAGTGACATCTGATTCAGAGTCGGAATCATCAAGCTCAAGTGGTCTGAACTGCAACAGCAACAAAATAGATGATTCAATTGTGTATCAGTTTCTTGGTGGCAAAAATGGTGGTGAAGGGTTTCAACCTGAGATTCTGAAGCTGATGATGAGAGAGGAAACAACAGAAGCTATGGAGGAGAAGCAATCTTCATGTGATGGAAAAGTTTCAGACTTTAGTGCTCGTGGCATTTATTCTGAAGATGGGTACGAGGAGGTGGAACCTTGCATGAAGGGTTTGAAGTCCTTCAATGCACATGGTTTTGGTGGTAAAGAATTTGCAAAAGCTGTGGTTAAAGATAAAAAAGAAGGTTCACAAAATGGATTTGTGTGCAGGAATAATGGATTGAAGAAAAGTGAAGAAACTAGGTGGGAAGATGAATTGTGTGATTCAGAATCTGATGAAGGTGACTTTGAATGGGAGCATGATGATTTAGTGGAGCAGCTAAAATTGGAATTGAAAAATTCTAGGCAAGGAGGACTTGCTACAATTTTAGAAGAGGAGGAGGAAGAAGACGAGGTGGTGGTTGCGGTGAACGAGAAAAGAGTGTCCTCAAGAGAGGTTGAAGATCCAAAGCCAGTGGAAATTGAAGAGAAGCTTGAGTACAAGGATCAAATTGATGAGATTGATCAAGTTTACAAGAGCTATGCAGAGAAGATGAAGAAACTTGATATCTTAAACTTCCAGACCATGCATGCATTAGGCCTGCTTCAACTAAAAGACCCTCAAAAACTAATTTCATTACCAAAATCCACAATCCAAGGTGCAAAGCCTGTGATCTCTCAGAACTTATGGCCACGCAAAGCATCAAAGAACTCATCAGATCCATTGGTGAAGCTTGTTCATGAACTGAATAGAGATTTGGAATTAGTATATGTAGGCCAAGTTTGCCTCTCTTGGGAAATTCTCTGTTGGCAACACAAGAAAGCCCTTGAGTTACAACAATATGATTCACAAGGGTCTCATAGTCATCATAGGTATAACCATGTTGCTGGTGAGTTTCAACTTTTTCAAGTACTAGTTCAGAGATTCATAGAGAATGAGCCATTCCAAGGACCTAGGCTGCAGAACTATGTCAAGAATCGTTGCGTGATTCGCAACTTGCTCCAAGTTCCAGGCATTAAAGATGACAATAAAGGGGATGAGGAAGAGGATGCTATTGCTAGTGGAAAGTTGGCAGATATCATCAAGGAATCAATGAGGGTGTTCTGGGAATTTGTTCGAGCAGATAAAGATTATGGGAATGTGATTTTTAAAGCTTCTCAGCACACCAGAATTGATCTTAAAGACCCTATGATTTCTGGTCTTATGGTGGGCATTAAAACACAACTACAAAAAAAGGAGAGAAGGCTAAAGGACATAGTGAGAACCGGGAATTGCATAGTGAAGAAGTTCCAAAAGCACCATGAGGATCAACTTGATCATGAGCAATTGGTTGCTCAGGTGGGGTTGAGATTGATTTCAAGGGTGGTTAACATGTCCAAGTTGAGAAAAGAACAGCTAATATGGTGCAATGAAAAGTTACACCTTATCAAGTTTTTGAGCAGGAAGATTGTTCAGCTCCTTGCGGCGCATCTTCGAGCTTTCTCAGAAAACCCTAACAACACAGACGCAGAGGCGCAGAGTGTGATCCAAGGAAGAAGAAGAAGGATGGTGCAGCGTCTCACGTATCGCAAGCGGCACAGCTATGCCACCAAGTCCAACCAGCACAGGGTCGTCAAAACCCCTGGTGGGAAGCTCGTTTATCAGGGAACTAAGAAGAGGGCCAGCGGACCCAAGTGCCCCGTCACCGGCAAGAGGATTCAGGGGATTCCACACTTGAGGCCTGCGGAGTACAAGAGGTCAAGGTTATCAAGAAACCGTAGGACTGTCAACCGTGCATATGGTGGAGTTTTGTCCGGAAGTGCTGTCAGGGAAAGGATTATCCGAGCCTTCTTAGTTGAAGAGCAAAAGATTGTGAAGAAGGTCTTGAAGATCCAAAAGGCAAAGGAAAAGCAGGCCTCAAAGGCTTAA 3360 0.4131 MGTKSLFMLKSHIDFVCVNMVWAFASLRVFVCNYVLYAFGSLLRYIFRFFDLGDAKGEIIVQKLEHVERNWVSDSKIDGFREELASFLFWSEDFHQETEGETESSVFVMKVAPEGEKRDGETECSVLMEKQSDIHEDGEKTDVPTENSVSEEIESNIQEDGISRSIEEEGSVFMNSDTDNPVIHKNSREVEIETEEIGSMETDSGVHQDDKKIDEDKTENSVYMENDSDLHHRIMKRKEEEKEMEEPVSAEIDSVVHEEFKKIDENETGSDVLLEKDPSEPVNENGKKIDENEGSVFKKQESNVNGEDTKREETNGPVFVDNNSVTTTSKCEYLSSKDISGFMEEPTTLRFSFREFYMGPDVSTVSDNAYASTEIIADKEFSEFGSEKKPVAQVQTEDSVQEEASAPSTHIPLHLESEMFGGSDSSDEDYFLYNENSVTSDSESESSSSSGLNCNSNKIDDSIVYQFLGGKNGGEGFQPEILKLMMREETTEAMEEKQSSCDGKVSDFSARGIYSEDGYEEVEPCMKGLKSFNAHGFGGKEFAKAVVKDKKEGSQNGFVCRNNGLKKSEETRWEDELCDSESDEGDFEWEHDDLVEQLKLELKNSRQGGLATILEEEEEEDEVVVAVNEKRVSSREVEDPKPVEIEEKLEYKDQIDEIDQVYKSYAEKMKKLDILNFQTMHALGLLQLKDPQKLISLPKSTIQGAKPVISQNLWPRKASKNSSDPLVKLVHELNRDLELVYVGQVCLSWEILCWQHKKALELQQYDSQGSHSHHRYNHVAGEFQLFQVLVQRFIENEPFQGPRLQNYVKNRCVIRNLLQVPGIKDDNKGDEEEDAIASGKLADIIKESMRVFWEFVRADKDYGNVIFKASQHTRIDLKDPMISGLMVGIKTQLQKKERRLKDIVRTGNCIVKKFQKHHEDQLDHEQLVAQVGLRLISRVVNMSKLRKEQLIWCNEKLHLIKFLSRKIVQLLAAHLRAFSENPNNTDAEAQSVIQGRRRRMVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQGTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLSRNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQKIVKKVLKIQKAKEKQASKA 1119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g0355 1119 ProSitePatterns Ribosomal protein L34e signature. 1014 1027 IPR018065 -
Aed11g0355 1119 MobiDBLite consensus disorder prediction 198 232 - -
Aed11g0355 1119 PANTHER FINGER FYVE DOMAIN PROTEIN, PUTATIVE (DUF1666)-RELATED 10 269 - -
Aed11g0355 1119 PANTHER FINGER FYVE DOMAIN PROTEIN, PUTATIVE (DUF1666)-RELATED 284 967 - -
Aed11g0355 1119 PANTHER OS09G0413600 PROTEIN 284 967 - -
Aed11g0355 1119 Gene3D - 1038 1119 - -
Aed11g0355 1119 MobiDBLite consensus disorder prediction 387 419 - -
Aed11g0355 1119 Gene3D - 1000 1036 - -
Aed11g0355 1119 PRINTS Ribosomal protein L34 signature 1043 1053 IPR008195 GO:0003735|GO:0005840|GO:0006412
Aed11g0355 1119 PRINTS Ribosomal protein L34 signature 1012 1025 IPR008195 GO:0003735|GO:0005840|GO:0006412
Aed11g0355 1119 PRINTS Ribosomal protein L34 signature 1025 1042 IPR008195 GO:0003735|GO:0005840|GO:0006412
Aed11g0355 1119 PRINTS Ribosomal protein L34 signature 1065 1087 IPR008195 GO:0003735|GO:0005840|GO:0006412
Aed11g0355 1119 MobiDBLite consensus disorder prediction 263 323 - -
Aed11g0355 1119 PANTHER OS09G0413600 PROTEIN 10 269 - -
Aed11g0355 1119 Pfam Protein of unknown function (DUF1666) 735 968 IPR012870 -
Aed11g0355 1119 Pfam Ribosomal protein L34e 1000 1095 IPR008195 GO:0003735|GO:0005840|GO:0006412
Aed11g0355 1119 MobiDBLite consensus disorder prediction 135 157 - -
Aed11g0355 1119 MobiDBLite consensus disorder prediction 392 406 - -
Aed11g0355 1119 MobiDBLite consensus disorder prediction 263 315 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g0355 Aed-Chr11 3019038 3032594 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed11g0355 1000 1118 Cytoplasmic Ribosomal Protein Gene Family AT1G69620 92.437 5.02e-67 219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed11g0355 - - gmx:100784525 1546.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed11g0355 11 3019038 3032594 Aed11g0355 11 3019038 3032594 ECH