Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g0341 ATGAACGTGGATCTGGAATCATTAGCAGAGGCCACTTCTGGGGCCATAGGATCACTCATCAGCACCACTATTCTCTACCCACTTGACACCTGCAAGACCAAGTACCAAGCTGAGGCTCGTTCCTCTGGTCGAACAAAATACAGGAATCTCACTGATGTATTATTGGAGGCAATATCTAATGGTCAGGTGCTTTCACTTTACCAGGGCCTTGGAACAAAGAATCTTCAATCCTTCATTTCACAATTTGTCTACTTCTATGGATACAGCTATTTTAAAAGACTGTATCTAGAAAAAAGCGGTTATAAATCCATTGGAACAAAAGCAAACTTGGTTATTGCTGCTGCTGCCGGGGCTTGCACAGCCATTGCGACTCAGCCCCTGGACACAGCCTCTTCAAGGATGCAGACAAGTGAATTTGGAAAGTCGAAAGGACTACTGAAGACCCTTACAGAAGGAACCTGGAGTGACGCATTCGATGGCCTCAGTATTTCCTTGCTGTTGACTTCAAACCCAGCAATTCAGTATACGGTGTTTGATCAGCTGAAACATCGAGCACTGAAGGATAAACAAAACAAAACTGATAAAGGAGCATCTCCAGCATCCCTTTCTGCATTTATGGCCTTTCTTTTAGGTGCAATTTCAAAGAGCATTGCTACCTGTCTAACATATCCAGCTATCAGGTGCAAAGTTATCATTCAAGCCGCAGACTCGGCTGAATCAACCTCGAAGACAAAGCTAAAATCACAGAAAACAGTGCCTAGTGTTCTCTATGGAATATGGAAAAGGGAGGGCATACCAGGATATTTTAAAGGACTGCATGCTCAGATCTTGAAAACTGTTTTGAGCTCAGCTCTGCTCTTAATGATCAAGGAAAAGATCTCTGCTACTACTTGGGTGCTTATCCTTGCACTTAAAAGGTACCTATTGCTTCCAAGGCCTAAGGTTAAGAACTTATAA 957 0.4305 MNVDLESLAEATSGAIGSLISTTILYPLDTCKTKYQAEARSSGRTKYRNLTDVLLEAISNGQVLSLYQGLGTKNLQSFISQFVYFYGYSYFKRLYLEKSGYKSIGTKANLVIAAAAGACTAIATQPLDTASSRMQTSEFGKSKGLLKTLTEGTWSDAFDGLSISLLLTSNPAIQYTVFDQLKHRALKDKQNKTDKGASPASLSAFMAFLLGAISKSIATCLTYPAIRCKVIIQAADSAESTSKTKLKSQKTVPSVLYGIWKREGIPGYFKGLHAQILKTVLSSALLLMIKEKISATTWVLILALKRYLLLPRPKVKNL 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g0341 318 ProSiteProfiles Solute carrier (Solcar) repeat profile. 5 94 IPR018108 -
Aed11g0341 318 ProSiteProfiles Solute carrier (Solcar) repeat profile. 104 184 IPR018108 -
Aed11g0341 318 PANTHER PEROXISOMAL ADENINE NUCLEOTIDE TRANSPORTER 1 1 317 IPR045900 GO:0005347|GO:0006635|GO:0015217
Aed11g0341 318 SUPERFAMILY Mitochondrial carrier 7 292 IPR023395 -
Aed11g0341 318 PANTHER PEROXISOMAL ADENINE NUCLEOTIDE CARRIER 1 1 317 - -
Aed11g0341 318 Gene3D Mitochondrial carrier domain 5 297 IPR023395 -
Aed11g0341 318 Pfam Mitochondrial carrier protein 202 294 IPR018108 -
Aed11g0341 318 Pfam Mitochondrial carrier protein 104 187 IPR018108 -
Aed11g0341 318 Pfam Mitochondrial carrier protein 6 98 IPR018108 -
Aed11g0341 318 PRINTS Mitochondrial carrier protein signature 113 135 IPR002067 GO:0055085
Aed11g0341 318 PRINTS Mitochondrial carrier protein signature 20 38 IPR002067 GO:0055085
Aed11g0341 318 PRINTS Mitochondrial carrier protein signature 67 85 IPR002067 GO:0055085
Aed11g0341 318 ProSiteProfiles Solute carrier (Solcar) repeat profile. 202 296 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g0341 Aed-Chr11 2833374 2836817 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed11g0341 23 311 Chloroplast and Mitochondria Gene Families AT1G25380 26.733 1.84e-13 68.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed11g0341 - - gmx:100301879 572.778
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed11g0341 11 2833374 2836817 Aed11g0341 11 2833374 2836817 ECH