Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g0339 ATGGTGATGGAAGATTCTCGTAGGAGCATGCTGGAGAACACTTCTTCAATCTCAGCGATTTTGAATTTCAACCCTATCGGAAACGTCAATGTAATTCAACAAGCGAAGCAAGAGCTTCGGGAAGAATCCGGCGGCGGAGGCGGCGGCGGTCTTGAATCGGTGGCTTCGGATTCCGATGGAAGCTTAGGGAGAAAGAGAAGGCCAGAGCAAGAACTATCACAAATGGGAAGCTATTTGATACAATCAAGCACAGGGTCACTTCCGGCGAGCCACGCTTCCAATACGGCGGCGTTTTGGATGGTGGCGGGTCACGGTAACCAATCCATGAATAACGGTGGCGGCGCCGCCGTAAACAATGGTAGCGACAATCCAATTTGGGCAATTCCCTCTGTTGGGAATAGTGGTGTGTATAGAGGAGCTATGTCTGCCCCAGGTGGCATTCATTTCATGAATTTCGCTTCTCCGATGAACCTCATGCCCGGAGGTCAACTAGGTTCCTCCATGGTTGGTGGTGGCGGCAACGGTGGTGCTCAACTTCTAAGTGAAAGTAACTTAGGCATGCTTACAGCCCTTAATGCCTACAGACAGATTCCGGCGAACGGCGTCTCGGAGTCTCCGGGCAGCGCAGGGCAACCTCACGGCGGAGACGATGGACGTGACTCCACCAGCCAACATTCCTGA 681 0.5272 MVMEDSRRSMLENTSSISAILNFNPIGNVNVIQQAKQELREESGGGGGGGLESVASDSDGSLGRKRRPEQELSQMGSYLIQSSTGSLPASHASNTAAFWMVAGHGNQSMNNGGGAAVNNGSDNPIWAIPSVGNSGVYRGAMSAPGGIHFMNFASPMNLMPGGQLGSSMVGGGGNGGAQLLSESNLGMLTALNAYRQIPANGVSESPGSAGQPHGGDDGRDSTSQHS 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g0339 226 PANTHER TCP FAMILY TRANSCRIPTION FACTOR 1 226 - -
Aed11g0339 226 MobiDBLite consensus disorder prediction 199 226 - -
Aed11g0339 226 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 1 226 IPR005333 GO:0003700
Aed11g0339 226 MobiDBLite consensus disorder prediction 38 73 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g0339 Aed-Chr11 2813427 2814107 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed11g0339 74 201 TCP Transcription Factor Family AT1G69690 36.957 1.06e-06 46.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed11g0339 - - gmx:100781296 379.022
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed11g0339 11 2813427 2814107 Aed11g0339 11 2813427 2814107 ECH
Aed11g0339 11 2813427 2814107 Aed6g1567 6 19744787 19746031 PCT