Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g0328 ATGCAAGATATGAGGAAGCAGAAGCAGCAGTTGCTGGTCAATGAAGAATCTAAGAAGAAGGAGCGTCACATTGTGACGTGGACTCAAGAGGAGGATGATATACTCAGAGAGCAGATTGGTGTACATGGAACTGAAAATTGGGCTATTATTGCTTCTAAATTCAAGGACAAAACAACAAGACAGTGCAGAAGAAGATGGTACACTTATTTGAATTCTGATTTCAAGAAAGGAGGATGGTCACCAGAGGAAGACATGCTTTTATGTGAGGCTCAGAAAATATTTGGTAACAGGTGGACAGAAATAGCAAAGGTGGTTTCAGGCAGAACCGATAACGCTGTGAAAAACCGCTTCTCCACATTGTGCAAAAAGAGAGCAAAATATGAAGCCTTAGCAAAAGAGAACAACACTTCATACATCAATTCAAATAACAAAAGGATTTTTCTCCAGCACGGTTGCGATACAGACGTAGCATCAGAATCTGCTATTAAGAAAATGAGGAGGTCCCATATCACTGATGCCGCAGAGAAGATCAACTTTGGAGACAGATCACATAAACAAAATGGAATTCCATTAAATCAGCAATCACGAACACCATTAACAGTTTTAGCTCAAAACTCTCACAATGTCAACTTGCCAGACCAGCATCATGTCTGCAATTTGAAGTTTAGTGATTATGCGCAAAACAACAAGATTCAAGGAACATTCCTTAAAAAGGATGACCCAAAGATAAACGCATTGATGCAACAAGCAGAGTTATTAAGTTCGCTAGCTCTAAAAGTTGATGCAGAGAACATGGACCAAAGTCTTGAAAATGCATGGAAGGTTCTTCAAGAATTTCTGAGCCGAACCAAAGAGTCAGACATTCTTAGATATAAGATTCCAGATTTACAACTTGTAGATCTTAAAGATTTATTGCAAGACTTAAAGAGCAGTAGTGAGGAAATCCAGCCATGCTGGAGGCAAATGGAACTATATGAAGACTCTCCAGGAAGTTCTGAATACAGTACAGGATCAACTCTCCTCCCTCATTCAGCTGGTGAGAATTTGGAACACTCACTGCATCAGGATATTGGAACCGAACTGAATATACAAATTGGAGATCCAGAAGGAGTTAGGGGATGTGACAAAGGGATAAACAATGATGCAATTGTTTCTCTCTTGTCAAGTTCGGAGGAGTTCAGTTCACCTATTCAAGTTACCCCTCTGTTTAGATCCTTAGCTGCTGGAATTCCTAGCCCACAATTTTCAGAAAGTGAAAGGAACTTCCTTATGAAAACACTCGGAATGGAGTCTCCGTCTCTCAATCCAAGTGCCAACCCCTCACAACCACCGCTCTGCAAAAGAGCCCTCCTAATCTGA 1359 0.4062 MQDMRKQKQQLLVNEESKKKERHIVTWTQEEDDILREQIGVHGTENWAIIASKFKDKTTRQCRRRWYTYLNSDFKKGGWSPEEDMLLCEAQKIFGNRWTEIAKVVSGRTDNAVKNRFSTLCKKRAKYEALAKENNTSYINSNNKRIFLQHGCDTDVASESAIKKMRRSHITDAAEKINFGDRSHKQNGIPLNQQSRTPLTVLAQNSHNVNLPDQHHVCNLKFSDYAQNNKIQGTFLKKDDPKINALMQQAELLSSLALKVDAENMDQSLENAWKVLQEFLSRTKESDILRYKIPDLQLVDLKDLLQDLKSSSEEIQPCWRQMELYEDSPGSSEYSTGSTLLPHSAGENLEHSLHQDIGTELNIQIGDPEGVRGCDKGINNDAIVSLLSSSEEFSSPIQVTPLFRSLAAGIPSPQFSESERNFLMKTLGMESPSLNPSANPSQPPLCKRALLI 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g0328 452 CDD SANT 26 70 IPR001005 -
Aed11g0328 452 PANTHER TRANSCRIPTION FACTOR MYB88 5 451 - -
Aed11g0328 452 Coils Coil 1 21 - -
Aed11g0328 452 PANTHER MYB PROTEIN-RELATED 5 451 - -
Aed11g0328 452 ProSiteProfiles Myb-like domain profile. 27 70 IPR001005 -
Aed11g0328 452 Pfam Myb-like DNA-binding domain 27 87 - -
Aed11g0328 452 SUPERFAMILY Homeodomain-like 23 117 IPR009057 -
Aed11g0328 452 Gene3D - 78 147 - -
Aed11g0328 452 SMART sant 75 123 IPR001005 -
Aed11g0328 452 SMART sant 23 72 IPR001005 -
Aed11g0328 452 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 75 125 IPR017930 -
Aed11g0328 452 CDD SANT 79 120 IPR001005 -
Aed11g0328 452 Gene3D - 14 75 - -
Aed11g0328 452 ProSiteProfiles Myb-like domain profile. 71 121 IPR001005 -
Aed11g0328 452 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 19 74 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g0328 Aed-Chr11 2667400 2674853 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed11g0328 65 451 MYB Transcription Factor Family AT1G14350 55.138 4.21e-140 405
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Aed11g0328 Myb_DNA-bind_6 1.7e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed11g0328 K09422 - gmx:100807667 816.994
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed11g0328 11 2667400 2674853 Aed11g0328 11 2667400 2674853 ECH
Aed7g1762 7 21030725 21036826 Aed11g0328 11 2667400 2674853 PCT