Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g0324 ATGGGGAAAGGAAGAAGTCCTGGGAAATGGATCAAGAACTTACTTTTGGGAAAGAAATCGTCTTCAAAGTCTACTTCATCAAAGAAGAATGACATTTTTAAATTTTCAAGTGACAAGGACGCGGTGGTGTCTTCTGAGGTAGCCGTGTCTGATCCAACGGATTCGTTGCTGATATCCGCACCAATATCTGTAGTTAATGATTCTAAAGGAGTGCTTTCCAAAAAGGAGGAAGTTAGTAGGTCATTACATGATAGGGATGTTCTTTCAACCGGAGTCGAAGAAGCTAAGGTGAAAGATGTTGCTAATGTTGGATCTCAAGAGGATCTTGAGAAACTCCAGCTTACAGAAGCAGCTATAAAAGTTCAGGCTGCTTGTAGAAGCTATCTGGCTCGTCAAGCATTTCAAAAACTCAAAAGTGTCATACAACTGCAAGCTTTTATTCGTGGCCACTTGGTTAGAAGACAAGCTGTTTCTGCATTATATTGTGTGAAGGGAATAGTAAAAGTTCAAGCACTGGCTCGTGGTTACAATGTTAGACGTTCTGATATTGGGGTTTCAGTCCAGAAAATTCGTAAGGATACTCATTGCTCAAACTCTGTTCGGGTAGTTTCATCCACACAGGCAGAGAAGCTGTCTGAAAACGTGTTTGTTTGCAAGCTTGTGGCTTCATCCCCATATGTAGTTCCTCTATCACTCAACGGTGATTCTGGAGAGCCTAACATGGCTCAAAAGTGGCTTGACTATTGGACACAGTCACACTTTTGGGCACCTCTTCCTGAATTTAAAAAGAAATTCGATTCTGTGTCTGATGAGAAAAATGGAAGTTCTCAGACAGCTCAAAAGGGACAAGTTAAAAAAAATACTCGGAAATCTCCTCCTGTGAAAGCTGACAATGGCTCAAATTTAGGTTCTAACAAATCTAAACAGCGTCTGAAAAAGGATTCAAGCCACCCATTGCCTCCAGCTCAGGAGCTCTCACAAAAAGAAACCGACAAAAGTTGTTTTGAAAAAACTCAAGCACATAATGTTTCAAATGGATCTGAGGTTAATGGAAAAAGAAAGCCCAGCAATAAAAAGATTTTGGATCATGCTGTAACTGAAGAGCAGGGCCCAAATGCCTCGTCAGAGAAAAAGAAAGATTCTACTGTGCCAAAGTCAAAAGAGTCTGATCCTGAGAAATGTCATGAACATCAAGCAAAAGACAAGAATGATAATGAGCCACATAATGATCCTCTTGCTGTCTTACAGACAAGTGTGAAGAATGGTGAAAATGAAGGAATTCAAGGAGTCAGTGAGAATTTGAATGGTGGTGACAATTGCATCAGTAACAATAGCCAAAGAAGAGCTTCACTACCTGCTAACTTCAATGATCAAGAGAATGAGTTATATAATACTCCTGTTACTCCGCGACTGCCTAGTTATATGGCTCCTACTGAATCTGCAAAAGCTAGGCTAAGAGGACAGGGCTCTCCAAGATTGGCTACTGATTTGGTAGACAAAAACAGTACAACCAGGCGGCATTCACTTTCATCCTCGCTAAATGGCAGGTCAGGTTCATTTTCCCCGAGAGCTGAAAGGCTGATAGGTGTGAGCGGCAGAGGAGGAGGGATAAGGTCTGATAGATCCCTGTCATCTTCAAGGGATGGGACTGAGAAGATGACCCAACCTCAGTGGAGAAGGTGA 1683 0.4183 MGKGRSPGKWIKNLLLGKKSSSKSTSSKKNDIFKFSSDKDAVVSSEVAVSDPTDSLLISAPISVVNDSKGVLSKKEEVSRSLHDRDVLSTGVEEAKVKDVANVGSQEDLEKLQLTEAAIKVQAACRSYLARQAFQKLKSVIQLQAFIRGHLVRRQAVSALYCVKGIVKVQALARGYNVRRSDIGVSVQKIRKDTHCSNSVRVVSSTQAEKLSENVFVCKLVASSPYVVPLSLNGDSGEPNMAQKWLDYWTQSHFWAPLPEFKKKFDSVSDEKNGSSQTAQKGQVKKNTRKSPPVKADNGSNLGSNKSKQRLKKDSSHPLPPAQELSQKETDKSCFEKTQAHNVSNGSEVNGKRKPSNKKILDHAVTEEQGPNASSEKKKDSTVPKSKESDPEKCHEHQAKDKNDNEPHNDPLAVLQTSVKNGENEGIQGVSENLNGGDNCISNNSQRRASLPANFNDQENELYNTPVTPRLPSYMAPTESAKARLRGQGSPRLATDLVDKNSTTRRHSLSSSLNGRSGSFSPRAERLIGVSGRGGGIRSDRSLSSSRDGTEKMTQPQWRR 560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g0324 560 ProSiteProfiles IQ motif profile. 136 165 IPR000048 GO:0005515
Aed11g0324 560 MobiDBLite consensus disorder prediction 504 519 - -
Aed11g0324 560 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 106 159 IPR027417 -
Aed11g0324 560 PANTHER IQ-DOMAIN 5-RELATED 1 557 - -
Aed11g0324 560 PANTHER IQ CALMODULIN-BINDING MOTIF PROTEIN 1 557 - -
Aed11g0324 560 Pfam IQ calmodulin-binding motif 164 180 IPR000048 GO:0005515
Aed11g0324 560 Pfam IQ calmodulin-binding motif 138 155 IPR000048 GO:0005515
Aed11g0324 560 Pfam IQ calmodulin-binding motif 115 135 IPR000048 GO:0005515
Aed11g0324 560 MobiDBLite consensus disorder prediction 266 560 - -
Aed11g0324 560 MobiDBLite consensus disorder prediction 538 560 - -
Aed11g0324 560 ProSiteProfiles IQ motif profile. 114 142 IPR000048 GO:0005515
Aed11g0324 560 Pfam Protein of unknown function (DUF4005) 458 528 IPR025064 -
Aed11g0324 560 SMART iq_5 136 157 IPR000048 GO:0005515
Aed11g0324 560 SMART iq_5 113 135 IPR000048 GO:0005515
Aed11g0324 560 MobiDBLite consensus disorder prediction 337 351 - -
Aed11g0324 560 MobiDBLite consensus disorder prediction 410 467 - -
Aed11g0324 560 Gene3D - 112 160 - -
Aed11g0324 560 MobiDBLite consensus disorder prediction 271 306 - -
Aed11g0324 560 MobiDBLite consensus disorder prediction 372 408 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g0324 Aed-Chr11 2610643 2616037 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed11g0324 4 560 IQD Protein Family AT1G14380 34.370 5.80e-71 236
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed11g0324 - - gmx:100800548 864.374
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed11g0324 11 2610643 2616037 Aed11g0324 11 2610643 2616037 ECH
Aed11g0324 11 2610643 2616037 Aed10g1023 10 8983819 8997740 ECH
Aed11g0324 11 2610643 2616037 Aed6g1557 6 19674610 19681490 ECH
Aed11g0324 11 2610643 2616037 Aed6g1557 6 19674610 19681490 PCT