Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g0320 ATGGATAAAGGATCATCAACACTAGCACTTGGGTTAGATATCAATTTGGTCCCTGTTGATGATGATGAATTAGCTTCAAATAATTCCATCACTGCAGAGAGTAGCTTTGGTCATGAGGAACCAAGTGAGATGTGGCCACCCAGTAAAGTTTTGAAGACAATGAAAAGTGTGGATAAAAGTACTGAAGCTTATTCTCAACATGATATTCATCAGGTCAAGAAGACTAGGGTTTCTATTAGAGCCAGATGTGATACCCAAACGATGAATGATGGGTGTCAATGGAGAAAATATGGACAGAAAATGGCAAAAGGAAATCCATGCCCCCGAGCTTACTATCGATGCACAACTTCTCCATCTTGTCCTGTGAGAAAACAGGTGCAAAGATGTGCTGAAGACATGACCATATTGATCACCACCTATGAAGGAACTCACAATCATCCACTTCCAACTTCAGCCACTGCAATTGCTTGCACAACTTCTGCTGCAGCTTCCATGCTTCAATCTCCCTCATTGAGTTCACAGCATGGACTAGTCAACTCAGCTATTTCCTCCATCATCAACTCTAGTGCTGCTTATAATTACATCCCTAATAATAATGCTCTAAATTTCTCCATATACCAAGTTTCAAGACCACACCAATTCTATTTCTCTAACTCATCTATTTCAACCATGAATTCTCACCCCACAATCACTTTGGACCTTACAACACCTTCCTCAAACTCAAGCCTCACTAATTGCATGCCAAAATACTCTTCAACAAACCTTAGTTTCTCTCCTCTACATTCTACTAGCATGCCTCAAACACCTTGGAGCAGTACTAATTATAGTGGTTACTTCAACTCTGGAGGAACAGTACTTTCTCAAAATAGAAACCATGGTGGTTATAATAACTTGTTGAACACTGGAAATCAAAATCAACCACCATATTCTCTAGGGCATCTTTACATGAGCAACACCAACAACTTCTCTCAACAAAAGTCTTTGCCTGCTGATCCCATTGCTGCTGCTGCAACCAAGGCAATCACAAGCAACCCGAAATTTCAATCAGCACTAGCAACTGCTCTCACAACATATGTTGGCAATGATGGTAATAGGTTAAGAGAAAATCATGTTCTTGAGAGTGCAGATCAACTGAACTTAAAGCTATGTAGTGAAAATAATAGCATAGGATGTGCATCATCATCAAGTTGCATTTTACACCATAATATGGATGGGCCATTGGGCTTATGGGTGAATTTTGGGCCTGCTAAGATCAGAGTTCCAGATATGGCGCAAGGACAAGACTGCAGCAAAAGCATCACACTTCCAAAGTGTGATTCCTATTTCGAAACCATACAATCCAGAAAGAGGCTACCGCTGACATTGCAGGAGACCTTGACAGATGCATTTGCAAAGATTCCTGTATCTTCTTTTCCAGCAGTGCCTAGTGGAAAAGTGATTGAAATTCTAGCAGACACGCCGGTTCTTGAAGCAGTTAAGATACTATCTGACAGAAACATTTTATCAGCTCCAGTTAAAGACCCAGATGCAGCTGATAGTTCAGATTGGAGAAGTAGGTATCTTGGCATCATAGATTATTCAGCAATCATTCTTTGGGTACTGGATGGTGCAGAGCTTGTACAAGCTGTACTATCGGCAGGTACAGCAACAGCTGCTGGAGTTGGTGCCGGAGCCGCTGGGGCTTTGGGGGCACTAGCATTGGGAGTGACAGGTCCTGCAGCAATTGCTGGGCTAACAGCTGCTGCAGCAGGTGCTGCACTGGGAGGTGGCATTGCTGCAGATAAAGGGGTGGCTAAAGATGCACCTCAAGCTGCTGATAAACTGGGAGATGACTTTTACAAAGTACTACTGGAAGAAGAACCCTTCAAGTCAACAACGGTGCGAACAATACTTAAATCATACCGATGGGCACCTTTAGTTCCAGTTTCAAGAAATAGTGCTATGTTGACTGTCCTGCTGCTTCTGTCAAAGTATAGGCTGAGGAATGTACCTGTGATAGAACCCGGCAAACCTGACATTACAAACTTCATTACTCAATCAGCAGTTGTCCAAGGTCTTGAGGGATGCAAAGGAAGAGATTGCATCCAGAGCAATGAATTGATTCTTGAAGCTTTCAAGCAGATGAAGGATAATCAAATTGGTGGTCTTCCTGTACTAGAGGGGCCAAAGAAGAGAATTGTTGGAACCTTGAGCATACGAGACATAAGACACTTGCTTCTAAGGCCTGAGCTTTTCACCAACTTTAGGAAGCTGACTGTGATGGATTTCATGAACAAAATTGTCTCTGCATCTTTAGAAACTGGAAAAGTTACCCAGCCAATAACATGCAAGCCTGACTCGACACTGCAGGATGTGATTCATACTCTTTCTTCTAAGTCTATTCACAGGATTTATGCAGTAGCTGGACAGGATGAAGTAGTTGGAGTCATTACTCTGAGAGATGTGATCTCTTGTTTTGTCACTGAACCTCCTTACAATTTTGATGATTACTATGGATTTGCAGTCAAAGAGATGCTGAATCGTTGA 2526 0.422 MDKGSSTLALGLDINLVPVDDDELASNNSITAESSFGHEEPSEMWPPSKVLKTMKSVDKSTEAYSQHDIHQVKKTRVSIRARCDTQTMNDGCQWRKYGQKMAKGNPCPRAYYRCTTSPSCPVRKQVQRCAEDMTILITTYEGTHNHPLPTSATAIACTTSAAASMLQSPSLSSQHGLVNSAISSIINSSAAYNYIPNNNALNFSIYQVSRPHQFYFSNSSISTMNSHPTITLDLTTPSSNSSLTNCMPKYSSTNLSFSPLHSTSMPQTPWSSTNYSGYFNSGGTVLSQNRNHGGYNNLLNTGNQNQPPYSLGHLYMSNTNNFSQQKSLPADPIAAAATKAITSNPKFQSALATALTTYVGNDGNRLRENHVLESADQLNLKLCSENNSIGCASSSSCILHHNMDGPLGLWVNFGPAKIRVPDMAQGQDCSKSITLPKCDSYFETIQSRKRLPLTLQETLTDAFAKIPVSSFPAVPSGKVIEILADTPVLEAVKILSDRNILSAPVKDPDAADSSDWRSRYLGIIDYSAIILWVLDGAELVQAVLSAGTATAAGVGAGAAGALGALALGVTGPAAIAGLTAAAAGAALGGGIAADKGVAKDAPQAADKLGDDFYKVLLEEEPFKSTTVRTILKSYRWAPLVPVSRNSAMLTVLLLLSKYRLRNVPVIEPGKPDITNFITQSAVVQGLEGCKGRDCIQSNELILEAFKQMKDNQIGGLPVLEGPKKRIVGTLSIRDIRHLLLRPELFTNFRKLTVMDFMNKIVSASLETGKVTQPITCKPDSTLQDVIHTLSSKSIHRIYAVAGQDEVVGVITLRDVISCFVTEPPYNFDDYYGFAVKEMLNR 841
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g0320 841 ProSiteProfiles CBS domain profile. 769 829 IPR000644 -
Aed11g0320 841 SMART WRKY_cls 88 148 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aed11g0320 841 Gene3D WRKY domain 73 150 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aed11g0320 841 PANTHER AMP-ACTIVATED PROTEIN KINASE, GAMMA REGULATORY SUBUNIT 432 694 - -
Aed11g0320 841 SMART cbs_1 478 534 IPR000644 -
Aed11g0320 841 SMART cbs_1 638 687 IPR000644 -
Aed11g0320 841 SMART cbs_1 694 740 IPR000644 -
Aed11g0320 841 SMART cbs_1 772 820 IPR000644 -
Aed11g0320 841 SUPERFAMILY WRKY DNA-binding domain 81 149 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aed11g0320 841 CDD CBS_pair_SF 478 545 - -
Aed11g0320 841 Gene3D - 472 690 IPR046342 -
Aed11g0320 841 Pfam CBS domain 695 740 IPR000644 -
Aed11g0320 841 Pfam CBS domain 771 817 IPR000644 -
Aed11g0320 841 PANTHER AMP-ACTIVATED PROTEIN KINASE, GAMMA REGULATORY SUBUNIT 695 841 - -
Aed11g0320 841 CDD CBS_pair_SF 694 816 - -
Aed11g0320 841 Pfam WRKY DNA -binding domain 89 147 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aed11g0320 841 SUPERFAMILY CBS-domain pair 695 825 IPR046342 -
Aed11g0320 841 ProSiteProfiles CBS domain profile. 688 745 IPR000644 -
Aed11g0320 841 PANTHER BNAANNG38820D PROTEIN 432 694 - -
Aed11g0320 841 ProSiteProfiles WRKY domain profile. 83 149 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aed11g0320 841 ProSiteProfiles CBS domain profile. 473 539 IPR000644 -
Aed11g0320 841 SUPERFAMILY CBS-domain pair 460 683 IPR046342 -
Aed11g0320 841 PANTHER BNAANNG38820D PROTEIN 695 841 - -
Aed11g0320 841 Gene3D - 694 822 IPR046342 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g0320 Aed-Chr11 2589173 2594924 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed11g0320 72 362 WRKY Transcription Factor Family AT1G18860 44.548 6.05e-54 194
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Aed11g0320 CBS 8.5e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed11g0320 - - gsj:114379046 649.818
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed11g0320 11 2589173 2594924 Aed11g0320 11 2589173 2594924 ECH
Aed11g0320 11 2589173 2594924 Aed10g1022 10 8973453 8977933 ECH
Aed11g0320 11 2589173 2594924 Aed6g1552 6 19646721 19650871 ECH
Aed11g0320 11 2589173 2594924 Aed3g0415 3 2962195 2964595 ECH