Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g0299 ATGAGTCGCAAGAGAGACAGGCACTACTTTTCCCGCCACGACGACGCCGCCAAGCGCCGCCGCCCCTTGCCGGAGCCCGCGGAGGAGGATAGGCCCACGAAGAGGCCGGCGCCGCCTTCCGCGGTGGTCGTGATGGGCCTCCCGCAGGACTGCTCCGTGCTCGATCTCAAGTCCCGATTCGAGATCTACGGCGCCATCTCCCGCATCCGCATCGACCGCGACGCCGTCGGATACATCACTTACCGGACCAAGGACTCCGCCGACGCCGCCATCGCCGCCGGCCTCGACCCCTCCTTCGGAGTCACCATTAACTCCAAAAAGGTTCAGGTGTTGTGGGCGACGGACCCTCTAGCCATGTGGAGGGAAGGAGTTGGTAATAGCAAGGATAAAAGTTCTATGTCAAAGCTTGTGCGAGCTGAGGTACCCTTGAGCAAGCATGGAAGGAGTAATAGACTTGCTTCTGCTATAGGGAATACCAAACGCAGTGAGGATAGCTCAGTTTTAGAAGTGCCTTTCAAGGGCAGAGAAATTGTTGCTTATGATGATCTCCTCTAA 555 0.5784 MSRKRDRHYFSRHDDAAKRRRPLPEPAEEDRPTKRPAPPSAVVVMGLPQDCSVLDLKSRFEIYGAISRIRIDRDAVGYITYRTKDSADAAIAAGLDPSFGVTINSKKVQVLWATDPLAMWREGVGNSKDKSSMSKLVRAEVPLSKHGRSNRLASAIGNTKRSEDSSVLEVPFKGREIVAYDDLL 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g0299 184 MobiDBLite consensus disorder prediction 1 41 - -
Aed11g0299 184 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 42 92 IPR000504 GO:0003723
Aed11g0299 184 SUPERFAMILY RNA-binding domain, RBD 27 121 IPR035979 GO:0003676
Aed11g0299 184 SMART rrm1_1 41 111 IPR000504 GO:0003723
Aed11g0299 184 CDD RRM_SF 42 110 - -
Aed11g0299 184 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 40 115 IPR000504 GO:0003723
Aed11g0299 184 Gene3D - 1 117 IPR012677 -
Aed11g0299 184 MobiDBLite consensus disorder prediction 7 35 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed11g0299 1 184 Homeobox Transcription Factor Family AT1G27050 52.683 1.93e-60 185
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed11g0299 - - ccaj:109806897 325.865
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed11g0299 11 2439611 2441811 Aed11g0299 11 2439611 2441811 ECH