Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g0289 ATGGGTGCTGCTGGTGACTACTACAAGTTACTGAAAGTTAAGCATGATGCAACGGATGAAGAGTTGAAGAAGGCTTATAAAAAATTGGCCTTGAAATGGCACCCAGATAAGAACCTTGAAGTTGAAGACCCTCTTATGAAGGAAGAGTTTGAGGCCAAGTTTAAACAAGTTTCTGAAGCCTATGATGTTCTCAGTGACCCCAAGAAGCGTCAGATCTATGACTTGTACGGTCACTATCCCCTTGACTCTCAACGCTTCACCAAGGAACATGGTGGTGATACTGTGGGAGTGGTTGAAAGCATCTTGCTTTGCACCCTTGAGGAGATTTACAACGGTTGCAAGAAGAAGTTGAAGGTCTCGAGGATTGTTCCTGATGAATTCGGAGTGTTGAAGTCTGTAGAAGAAATCTTGAAGATAGACATAAAACCTGGTTGGAAGAAGGGCACAAAAATCACTTTTCCAGGGAAAGGAAACCAAGAACCAGGATTTGCTCCAGCTGATCTAATATTTGTGTTGGATGAGAGGCCTCATGCTATTTTCAAGAGGGATGGAAATGAACTTGTAGTGATGCAGAAGATATCACTTGTGGATGCTCTCATAGGAAAGACTCTCAACTTGAGTACCTTGGATGGAAGAGTTCTCACAATCCAAGTGACAGATATTGTGAAACCAGGCTATGAGATTGTGGTCCCAAATGAAGGCATGCCAATCTCAAAGGAACCTGGCAAGAAAGGAACCCTCAGAATCAAGTTTGATGTTATCTTTCCATCAAGGCTCACTACACAACAGAAGTGTGATCTAAGAAGGATTCTCAGTGATGCTGATTACTAA 831 0.4248 MGAAGDYYKLLKVKHDATDEELKKAYKKLALKWHPDKNLEVEDPLMKEEFEAKFKQVSEAYDVLSDPKKRQIYDLYGHYPLDSQRFTKEHGGDTVGVVESILLCTLEEIYNGCKKKLKVSRIVPDEFGVLKSVEEILKIDIKPGWKKGTKITFPGKGNQEPGFAPADLIFVLDERPHAIFKRDGNELVVMQKISLVDALIGKTLNLSTLDGRVLTIQVTDIVKPGYEIVVPNEGMPISKEPGKKGTLRIKFDVIFPSRLTTQQKCDLRRILSDADY 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g0289 276 ProSiteProfiles dnaJ domain profile. 6 77 IPR001623 -
Aed11g0289 276 Gene3D DnaJ domain 2 96 IPR036869 -
Aed11g0289 276 CDD DnaJ_C 98 259 - -
Aed11g0289 276 PRINTS DnaJ domain signature 26 41 IPR001623 -
Aed11g0289 276 PRINTS DnaJ domain signature 49 69 IPR001623 -
Aed11g0289 276 PRINTS DnaJ domain signature 69 88 IPR001623 -
Aed11g0289 276 PRINTS DnaJ domain signature 8 26 IPR001623 -
Aed11g0289 276 SUPERFAMILY HSP40/DnaJ peptide-binding domain 180 264 IPR008971 GO:0006457|GO:0051082
Aed11g0289 276 SMART dnaj_3 5 69 IPR001623 -
Aed11g0289 276 Gene3D - 177 257 - -
Aed11g0289 276 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 1 273 - -
Aed11g0289 276 Gene3D - 97 175 - -
Aed11g0289 276 Pfam DnaJ C terminal domain 102 256 IPR002939 -
Aed11g0289 276 ProSitePatterns Nt-dnaJ domain signature. 54 73 IPR018253 -
Aed11g0289 276 SUPERFAMILY HSP40/DnaJ peptide-binding domain 102 177 IPR008971 GO:0006457|GO:0051082
Aed11g0289 276 CDD DnaJ 6 66 IPR001623 -
Aed11g0289 276 SUPERFAMILY Chaperone J-domain 6 87 IPR036869 -
Aed11g0289 276 Pfam DnaJ domain 6 74 IPR001623 -
Aed11g0289 276 PANTHER DNAJ HEAT SHOCK FAMILY PROTEIN 1 273 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g0289 Aed-Chr11 2389999 2391566 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed11g0289 7 76 C2H2 Transcription Factor Family AT1G74250 37.143 4.35e-09 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed11g0289 K09510 - gmx:100814971 473.781
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed11g0289 11 2389999 2391566 Aed11g0289 11 2389999 2391566 ECH
Aed7g1731 7 20685078 20687566 Aed11g0289 11 2389999 2391566 PCT