Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g0287 ATGTCTTCCTCCATCTTCATCATCATTCTTCTCCTCTCCCTCTACCTCTTCTCCACACTTTCCGTCTCTCAAACATCACCATGCTCTTCCAGTTTAAACACAAAGTCACAACACCCCTGCCCTCCCTTTCCTTCTAATAGCTGTGGCCACCCCTCCTTCCACCTCACCTGCTCCACCCCTCACTCCCGTATCTCCATTAACAACCTCTCCTTCTCAATCCTCTCCTACAACCTCAACACCTCCTCCGCCACCCTCTCCCCTGCCCCTGCCCCTCACAACAACAACACTCACTGCCCCAACAACTTCCCTTCCATCCCCACACACCCCATCAACCTCACCTCCACCCCCTTCCGAATCTCCGACGCCACCTGCTCCCGCCTCTCCTTCCTCCGCCCCTGCTCCCCCCCCTCCCTCCCCAACTGCTCCCACTGCCCCTTCCAATGCCACCTCATCCAAAACCCCTCCCACCTCCTCCACGATTGCACTTCAACCCACCATCACTCCCCCTCCGACTCCGATCAATCCTCCTCCAACTGCCAAACCGACATCCTCGGCTTCCTCGACCAACTCCTCCAAACCGGAATCCAACTCGACTGGGACCCAATCCGTGACCCCTACTTCACCAACTGCTCCACCTGCCAACGCTCCCAATCCACACTCTCCCCTCCATGGATCCGCAAATTCTCCGCCTCACCCAACAAAACCGCCATTTTAGCCACCATCATCGCCATAACCTCCCTACTCCTTCTAATTTCAGTCACCATCGCAATCCTCCGCTCAATCAGATCAAAATCCTCATCAGCAACGCAGCAAGACCCCAACACGCTTTTCCTCCACAACCACCGCTCCGCTAGCCTCCTCCCTCCCGTTTTCACGTACGAAGACCTATCCCTCTCCACCAACAACTTCGACTCCAAACGCAAAATCGGCGACGGCGGCTTCGGCTCTGTCTACCTCGCTCACCTCCGCGACGGTCGCCTCGCGGCGGTGAAGTACCTCCACCGCCACCACGCCACCGCCGCGTTCTCCACCAAATCCTTCTGTAACGAGATTCTCATCCTCTCTTCGATAAACCACCCGAGCTTAGTGAAGCTTCACGGATACTGCAGCGATCCGAGAGGGTTGCTTCTCGTCTACGATTACATCCCTAACGGAACCCTAGCGGAGCATCTCCACAACCGTAAGGGCTCGCTGACGTGGCAGGTAAGACTCGACATCGCGTTGCAAACGGCGTTAGCGATGGAGTATCTTCATTTCTCAGTGGTCCCGCCGATTGTGCATAGAGACATAACTTCGTCGAATATTTTCGTGGAGAGGGATATGAGGATAAAGGTTGGGGATTTCGGGTTATCGAGGCTTTTGGTGGTGCAGGATACGACGTCGTCTTCGAACGGGTTTGTGTGGACCGGGCCTCAAGGTACGCCGGGGTATTTGGACCCGGATTATCACCGCTCGTTCCGGTTAACCGAGAAGAGTGACGTGTACAGTTTTGGAGTGGTGTTGTTGGAGCTTATCTCGGGGTTGAGAGCGGTGGATCAGAGTAGAGACAAGCGCGAAATGGCGCTTGCGGATTTGGTTGTTTCTCGGATCCAGACGGGGCTGTTGCATCAAGTGCTTGACCCGGTTCTTAACGGCGGAGACGCCGTCGCCGCCGTTGCGGAGCTTGCTTTCCGGTGTGTCGCGGCGGATAAAGACGACCGCCCGGACGCGAGGGAGGTGGTGGAGGAGCTGAAGCGGGTGCGGAACCGGACAGTGACGGTGACGGCGGCGAAGGAGTGA 1779 0.5666 MSSSIFIIILLLSLYLFSTLSVSQTSPCSSSLNTKSQHPCPPFPSNSCGHPSFHLTCSTPHSRISINNLSFSILSYNLNTSSATLSPAPAPHNNNTHCPNNFPSIPTHPINLTSTPFRISDATCSRLSFLRPCSPPSLPNCSHCPFQCHLIQNPSHLLHDCTSTHHHSPSDSDQSSSNCQTDILGFLDQLLQTGIQLDWDPIRDPYFTNCSTCQRSQSTLSPPWIRKFSASPNKTAILATIIAITSLLLLISVTIAILRSIRSKSSSATQQDPNTLFLHNHRSASLLPPVFTYEDLSLSTNNFDSKRKIGDGGFGSVYLAHLRDGRLAAVKYLHRHHATAAFSTKSFCNEILILSSINHPSLVKLHGYCSDPRGLLLVYDYIPNGTLAEHLHNRKGSLTWQVRLDIALQTALAMEYLHFSVVPPIVHRDITSSNIFVERDMRIKVGDFGLSRLLVVQDTTSSSNGFVWTGPQGTPGYLDPDYHRSFRLTEKSDVYSFGVVLLELISGLRAVDQSRDKREMALADLVVSRIQTGLLHQVLDPVLNGGDAVAAVAELAFRCVAADKDDRPDAREVVEELKRVRNRTVTVTAAKE 592
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g0287 592 ProSiteProfiles Protein kinase domain profile. 303 580 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed11g0287 592 ProSitePatterns Tyrosine protein kinases specific active-site signature. 425 437 IPR008266 GO:0004672|GO:0006468
Aed11g0287 592 ProSitePatterns Protein kinases ATP-binding region signature. 309 331 IPR017441 GO:0005524
Aed11g0287 592 Gene3D Phosphorylase Kinase; domain 1 279 381 - -
Aed11g0287 592 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.5 28 586 - -
Aed11g0287 592 CDD STKc_IRAK 309 579 - -
Aed11g0287 592 Gene3D Transferase(Phosphotransferase) domain 1 382 591 - -
Aed11g0287 592 Coils Coil 591 592 - -
Aed11g0287 592 Pfam Protein tyrosine and serine/threonine kinase 306 577 IPR001245 GO:0004672|GO:0006468
Aed11g0287 592 SUPERFAMILY Protein kinase-like (PK-like) 283 577 IPR011009 -
Aed11g0287 592 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 28 586 IPR045274 GO:0007166
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g0287 Aed-Chr11 2366874 2368687 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed11g0287 12 584 Receptor kinase-like Gene Family AT1G69910 57.097 0.0 654
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Aed11g0287 Pkinase 9.4e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed11g0287 - - gmx:100816739 907.131
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed11g0287 11 2366874 2368687 Aed11g0287 11 2366874 2368687 ECH