Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g0272 ATGAGCGAGCGCGTGCCTTCGTCGCGAACGATTCGACTAGGCCGAGTCGAGCCTCAAGCCCCCGGCCACCGCACCATCTTCTGCAACGATCGCCAAGCCAATCTTCCCGTTCGCTTCAAGGGGAATTCAATATCGACTACAAAGTACAACTTTTTCACTTTTCTACCGAAAGGATTGTTTGAACAGTTCAGGCGGGTTGCTAATCTCTACTTTCTTTCAATCTCAATTTTGTCAACCACACCAATCAGCCCTGTGTCTCCAATAACAAATGTGCTTCCTCTGTCTTTGGTGCTTCTCCTCTCTCTTATTAAGGAGGCTTTTGAGGACTGGAAGCGTTTTCAAAATGACATGGCTGTAAACAATAATACAGTAGATGTTTTGCAAGATCAAAAGTGGGTGTCTATACCCTGGAAAAAGTTACAAGTTGGGGATGTTGTCAAGGTTAAGCAGGATGGATTCTTTCCTGCAGATCTGCTTTTCCTGGCTAGTACAAATGTAGATGGTGTCTGCTACATTGAGACTGCTAATTTGGATGGTGAAACCAATTTGAAGATTAGGAAAGCATTGGAAAAGACTTGGGATTACCAAACTCCAGAGAAGGCATCTGAGTTTAAAGGTTCTAGTGAAGTCGATGACAATCTATATGCTGGTGAACTTCAGTGTGAACAACCTAACAATTCATTGTATACCTTCACTGGAAATCTTATAATTCAAAATCAAATACTTCCTGTCAGTCCAAACCAACTTCTGTTGCGAGGATGCAGTCTCAGGAATACAGATTATATTGTTGGGGTTGTTATTTTTACAGGACATGAAACAAAGGTGATGATGAATGCTATGAATGTTCCTTCCAAAAGAAGTACATTGGAGAGGAAGCTTGACAAGCTCATACTTGCTCTCTTTGTGACTCTCTTTGTTATGTGTTTCATTGGAGCTGTAGGCAGTGCTATCTTTGTAAACAAAAAGTATTTCTATTTACGTCTTGAATCATCAGAGGAGGGCTCAGGACAGTTCGATCCAAGAAACAGATTTTTGGTTTTCCTTCTCACTATGTTTACCCTCATCACTTTATACTCAACAATCATCCCCATTTCACTTTATGTATCAATAGAGATGATCAAATTTATTCAGTCCACTCAATTTATCAACAAGGACTTGCACATGTACCATTACGAAACTAATACCCCAGCATTGGCCAGAACTTCAAATTTGAACGAAGAACTTGGGCAGGTGGAATACATCTTCTCAGACAAAACTGGCACTCTGACAAGAAACTTAATGGAGTTCTTTAAGTGTTCAATTGGAGGAGAGGTCTATGGAAATGGCATGACTGAAATTGAGAAGGAAATAGCAGAGCGCAGTGGCTTAAAACTGGAGGAAAATATATCAATCAATGCATTGCGAGAGAGGGGTTTTAATTTTGATGATGCTAGGCTTATGAGAGGAGCTTGGAGGAATGAGCCAAATCCTGATAGCTGCAAGGAATTCTTCAGGTGCCTTGCCATATGCCATACTGTGCTCCCTGAGGGCGATGAGACCCCCGAGAAGATCAAATATCAAGCTGCATCACCTGATGAGTCTGCTTTGGTTATTGCTGCGAAGAACTTTGGTTTTTTCTTTTTCAGACGCACTCCTACAATGATATATATTCGTGAATCTCATGTTGAGGAGATGGGTAAAATTCAAGATGTGTCATATGAGATTTTGAATGTGCTTGAATTTAACAGTACAAGGAAGCGTCAGTCTGTTGTATGTCGTTGTCCAGATGGGAGGCTTGTATTGTACTGCAAGGGTGCTGATACTGTGATATATGAGAGACTAGCTGATGGTTATAATGATATAAAAAAAGTTACTAGGGAACATTTGGAGCTATTTGGGTCTGCTGGACTACGCACATTATGCCTGGCCTACAAAGAATTACATCCTGATGTTTATGAAAGCTGGAATGAGAAGTTCATCCAAGCCAAATCTTCTCTACGTGATCGTGAAAAGAAGTTAGATGAGGTTGCAGAACTTATAGAAAATGATCTCATTTTGATTGGTAGCACTGCCATAGAAGACAAGCTTCAAGAGGGAGTACCAGCCTGCATTGAGACTCTTCAAAGAGCTGGTATTAAAATTTGGGTGCTTACAGGGGACAAGGTTGAAACAGCAATTAATATTGCCTATGCATGCAATTTAATAAACAATGAGATGAAGCAATTTATTATCAGTTCAGAAACTGAGGTGATTAGAGAAGTTGAAGACAGGGGGGACCAAGTAGAAATTGCACAATTTATCAAAGAAGAAGTGAAGAAAGAACTGAAGATGTGCCTCGAAGAAGCACAGAGCTATTCTAGCTCTCCATCTGGACCAAAATTAGCACTTGTGATTGATGGAAAATGTCTAATGTATGCATTGGATCCAAGTTTGAGAGTCATGCTACTCAATTTGAGCATGAACTGCCATGCTGTTGTTTGCTGCCGAGTTTCTCCTTTACAGAAAGCACAGGACGTCAGTGCATCCCTATCCAAGAAGTATCCTGAACTATACAGGGAGGGAATAAGAAATGTCTTTTTCAAATGGAGAGTTGTGGCTATATGGGCCTTTTTTTCGGTCTACCAGTCACTTATATTCTTCTACTTTGTGAGTTCGTCAAGTTTAAGTGCTAAAGATTCCGCAGGAAAGGTGTTTGGACTCTGGGATGTCAGCACAATGGCCTTCACATGTGTTGTAGTAACCGTTAACTTGCGACTTCTTATGATTTGTAATTCAATCACAAGATGGCACTATATTAGTGTTGCTGGAAGTATATTAGCATGGTTTATTTTTGTCTTTATATATTCTGGGATCACCACACCTTATGCTCGACAGGAGAATCTGTATTTTGTCATATATGTCCTGATGAGTACATTATATTTCTACATCACATTAGTTCTTGTTCCTGTTGCGGCACTTTTCGGTGACTTTGTTTACCAAGGGGTTCAGAGATGGTTCTTCCCTTACGATTATCAAATTATTCAAGAAATGCATAGACATGATATTGATGACACCAACAGGGCACAATTTCTAGAGATAGGAAACCAGCTTACTCCAGCCGAGGCTAGGAGCCATGCCATATCTCAACTCCCACATGAGATATCAAAGCACACTGGGTTTGCTTTTGATTCACCTGGTTATGAGTCATTTTTTGCTGCGCAGCTTGGTGTATATGCCCCACAAAAGGCATGGGATGTTGCAAGGCGAGCTAGCATGAGATCTCGGCCAAAGATTGGACAGAAAAAGTAA 3267 0.4071 MSERVPSSRTIRLGRVEPQAPGHRTIFCNDRQANLPVRFKGNSISTTKYNFFTFLPKGLFEQFRRVANLYFLSISILSTTPISPVSPITNVLPLSLVLLLSLIKEAFEDWKRFQNDMAVNNNTVDVLQDQKWVSIPWKKLQVGDVVKVKQDGFFPADLLFLASTNVDGVCYIETANLDGETNLKIRKALEKTWDYQTPEKASEFKGSSEVDDNLYAGELQCEQPNNSLYTFTGNLIIQNQILPVSPNQLLLRGCSLRNTDYIVGVVIFTGHETKVMMNAMNVPSKRSTLERKLDKLILALFVTLFVMCFIGAVGSAIFVNKKYFYLRLESSEEGSGQFDPRNRFLVFLLTMFTLITLYSTIIPISLYVSIEMIKFIQSTQFINKDLHMYHYETNTPALARTSNLNEELGQVEYIFSDKTGTLTRNLMEFFKCSIGGEVYGNGMTEIEKEIAERSGLKLEENISINALRERGFNFDDARLMRGAWRNEPNPDSCKEFFRCLAICHTVLPEGDETPEKIKYQAASPDESALVIAAKNFGFFFFRRTPTMIYIRESHVEEMGKIQDVSYEILNVLEFNSTRKRQSVVCRCPDGRLVLYCKGADTVIYERLADGYNDIKKVTREHLELFGSAGLRTLCLAYKELHPDVYESWNEKFIQAKSSLRDREKKLDEVAELIENDLILIGSTAIEDKLQEGVPACIETLQRAGIKIWVLTGDKVETAINIAYACNLINNEMKQFIISSETEVIREVEDRGDQVEIAQFIKEEVKKELKMCLEEAQSYSSSPSGPKLALVIDGKCLMYALDPSLRVMLLNLSMNCHAVVCCRVSPLQKAQDVSASLSKKYPELYREGIRNVFFKWRVVAIWAFFSVYQSLIFFYFVSSSSLSAKDSAGKVFGLWDVSTMAFTCVVVTVNLRLLMICNSITRWHYISVAGSILAWFIFVFIYSGITTPYARQENLYFVIYVLMSTLYFYITLVLVPVAALFGDFVYQGVQRWFFPYDYQIIQEMHRHDIDDTNRAQFLEIGNQLTPAEARSHAISQLPHEISKHTGFAFDSPGYESFFAAQLGVYAPQKAWDVARRASMRSRPKIGQKK 1088
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g0272 1088 SUPERFAMILY Calcium ATPase, transduction domain A 121 276 IPR008250 -
Aed11g0272 1088 Pfam E1-E2 ATPase 120 371 - -
Aed11g0272 1088 TIGRFAM ATPase-Plipid: phospholipid-translocating P-type ATPase, flippase 39 830 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016021|GO:0140326
Aed11g0272 1088 Pfam Cation transport ATPase (P-type) 515 606 - -
Aed11g0272 1088 Gene3D - 684 779 IPR023214 -
Aed11g0272 1088 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 7 830 - -
Aed11g0272 1088 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 830 1084 - -
Aed11g0272 1088 Gene3D - 104 280 - -
Aed11g0272 1088 Gene3D - 420 683 IPR023299 GO:0000166
Aed11g0272 1088 Pfam Phospholipid-translocating P-type ATPase C-terminal 830 994 IPR032630 -
Aed11g0272 1088 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 7 830 - -
Aed11g0272 1088 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 830 1084 - -
Aed11g0272 1088 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 422 684 IPR023299 GO:0000166
Aed11g0272 1088 CDD P-type_ATPase_APLT_Dnf-like 41 876 - -
Aed11g0272 1088 SUPERFAMILY Calcium ATPase, transmembrane domain M 37 994 IPR023298 -
Aed11g0272 1088 SUPERFAMILY HAD-like 410 832 IPR036412 -
Aed11g0272 1088 ProSitePatterns E1-E2 ATPases phosphorylation site. 417 423 IPR018303 -
Aed11g0272 1088 Pfam Phospholipid-translocating ATPase N-terminal 26 90 IPR032631 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g0272 Aed-Chr11 2265311 2278844 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed11g0272 3 833 Primary Pumps ATPases AT1G59820 78.005 0.0 1370
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed11g0272 K14802 - gmx:100815547 1472.99