Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g0271 ATGGATTTTTATGTGCTTTATAGTTTTTGTTTTAAATTTCACAAGCATGTGATGGTGATTGACTCATTTTCTGACTTTCTATCTATTTTGTTTTTCAGTGATAGTGATAAGAGTGATAAGCTCATTCAGCATTTGGTGCAAACAATTTTGAAGCAGATGAGGAACACACCACTGAATGTGGCTCCGTACACTGTTGGGGTGGACGATAGAGTTGAAGAATTGAAAAAGCTGTTAGATGTAAAATCCAACGATGTAAGGGTTTTGGGGTTGTATGGAATGGGTGGTGTTGGTAAAACAACCTTAGCCAAAAGCCTCTTTAACAACCTTGTTGCTCATAATTTTGAGCGACGCAGTTTCATTCCAAATATTAGATCACAAGTAGTCTCCAAACATGATGGTTTGGTTTCTCTACAAACCACAATTCATAGTGATCTTTCTGGTGGAAAAAAGGATCTAATATTCAATGATGCTGACCATGGCATTTCCTCTACCAAAAGAATACTGCATGAGAATCGAGTTTTGTTGATCTTAGATGATGTTGATAATGAAGAGCAACTTCATTTTTTGTTGGGTGAGAGGGACTGGTTTTACAAAGGAAGCCGTGTTGTAATAACCACAAGGGATAGAGAAGTTTTGACTAAGAGTTATGTTGATGTGCTTTATGAGGTGAAGGAATTGGAATTCTCACCAGCAATGGAATTGTTTTGTTACCATGCAAAACCCTTAGAGGGTTTTTTGGACCTTTCAAAGCAAATTGTGGAGATCACAGGAGGGTTGCCTTTGGCCTTGGAAGTTTTTGGCTCTTTTCTGTTTGACAAGAGAACAATGAGGGAATGGAAAGATGCTGTGGAGAAGATGAAACAGAATATTAGTCCTTCTAGTCTTCATGATGTGCTGAAAGTCAGTTTTGATGCTTTGGATGAACAAGAGAAATGTGTGTTCCTTGACATTGCTTGTTTGTTTGTGCAAATGGAGATGAAGAGGGATGATGTGGTTGATATATTGAATGGGTGTAATTTTAGAGGAGATATAGCACTCACTGTGCTCACTGCAAGATGTCTAATTAAAATAAGTGGTGATGGTAAGGTGTGGATGCATGATCAAATTAGAGACATGGGAAGGCAAATTGTTCATAGTGAAGGACTTTCAGATCCTGGTCAACGTAGCAGGCTTTGGGATCGTGATGAAATCTTGACTGTCTTGAATAGTATGAAGGGAACAAGAAATGTTCAAGGGATTGTCCTAGATTGTGTCAAGAGACGCATGTCCACTCCTAGAGATCGATCTGCTGATGAAATCACATGGGAAAGTTTTCGACGTGAGCCCAGTTTCAAATCTGCAATAGAATATATTAAAGAGAAGTATAAAAAGTATGTGCTGGACAGAGAAGAGAAAGCAAAAGAGGTTGTACTTCAGACAATGCACTTTGAATCAATGGTTTCCTTAAGACTGCTTCAAATTAATTATTCTAGATTAGAAGGACACTTCAGATGCCTTCCCCAAGGGCTGAAGTGGTTACAATGGAAACAATGTCCATTAAGGTATGTGCCTTCTAGCTTTTGTCCTTCGGAACTTTCTGGTATGGATCTCTCTGAAAGTAAGATTGAAACTGTGTGGGGTGGACGCAGTAATAACAAGGTGGCTAAGAACTTGATGGTTTTAAACCTCTCCAATTGCCACCGTTTGACAGAAACTCCTGACTTAACAGGGTATCTATCTCTAAAAAAAATTATCTTGGAAAATTGCTCTCATTTAACAAGGATTCATGAATCACTTGGAAGTCTATGTTCCTTAGTTCACTTGAACTTGAGCCTCTGCTGTGACCTTGTCGAACTACCTGGTGATGTCTCTGGGCTGAAAAATCTCGAGGACCTTATTCTTTCCGGGTGCTGGAAATTGGAAGCATTACCAAAAGACTTAAGCTGCATGGTTTCTTTAAGACAACTTCTTCTTGATGGAACTACTATCTCTGAGCTACCTGAGTCCATCTTCCACCTCACAAAACTTGAAATTCTGAATGCAAATGCATGTGAGTCTCTTAAGAGATTACCTACCTGCATTGGAAAACTCTGCTCCCTGCAAGAGTTGTCTCTCAACCATACAGCATTAGAGGAATTGCCAGATTCTGTTGGTTCTTTGGAAAACCTTGAGATGCTTAGTTTGGTGGGGTGTAAGTCACTCTCAGTGATTCCTAACTCTATTGGGAAACTAATTTCATTGAATCGATTATTTTTGAACATCAGTGGAATTAAAGAATTACCTGCTTCGGTTGGTTCTTTATCATTTTTAAGGAAACTGTCTCTTGGAGACTGCACTTCTCTTGACAATTTGCCTGTGTCAATAGAAGCGTTAGCTTCTATTGCTGAGCTTCAATTAGATAATACAAGAATTACCAATTTGCCAGATCAAATGTTTGTGGCCATGCAAATGCTAGAAAAGCTTGAGATGAGAAAATGTCAGCATCTCAGGTTTCTACCAGTATCATTCGGCTGTCTCTCAGCTCTTACCAGTTTGGACTTGCATGAGGCAAGCATTACTGAATTGCCAGAATCTGTAGGAATGTTGGAAAATCTTATTCGGTTGAGGTTAGACATGTGCAAACAGCTCCAAAGGCTTCCAGATTCATTTGGAAATTTGAAATCTTTGCGATGGTTACTGATGAAGGAAACAGCACTTACAGATCTACCAGAGACCTTTGGGATGCTTACAAGCCTGGTAATGCTAGACATGGAAAGAAGACCCTATCTTGATGGGTCTGGAAACAACATGCCTACTGGGGTCATAATTCCTAACAAACAAGAACCTAATTCAGAGGCAATATTAAGTTCTTTTTGCAATCTAACCTCGCTGGAAAAGTTAAATGCTCATGGATGGGAAATATCTGGAAAAATTCCAGATGAATTTGAAAAGCTATCATCACTAGAAAATTTAACTTTTGGTCACAACAATATTTGCAGTCTTCCAGCCAGCATGACAGGTCTCTCCTATCTCAAAAAGCTTTTGTTGCCAGATTGCAAGGAGCTCATGTTTCTGCCTCCTCTTCCCTCTAGCCTAGAAGAGCTTAATCTTGCAAACTGTATTGCAGTACAGTGTATGTATGATATTTCAAACCTGAAGCTCTTAGTGGAGTTGAACCTTACAAATTGTGAAAAGGTGGCGGATATACCAGGGCTTGAACATTTGAAGTCCTTAAGAAGGTTGTACATGAATGGTTGCGTTGGATGCTCCCTTGCAGTAAAGAGAAGATTTTCCAAGGTTCTACTTAAAAAATTAGAGATTTTGATTATGCCTGGAAGGAGAGTCCCGGATTGGTTTACAGCAGAACCAGTTGTGTATTCCAAGCGAAGAAACCGTGAGCTTAAAAGTATTATTTGTTCTGGTGTTCTCTCTTTCAACAATATACCTGAAAACAAAAGAGAAGAACTGCAGATAGTGGATGTTCAAGGGAAAGTCTTCAATTTGACCGATAGAGTGTTTAGCACAACGTTTCGCCTTCTAGGAGTACCTAGGACAAATGAAGACCACATATTTTTGCGCAGATTTGGAGTTATGTCTTCGTTAGTCTTTATGTTAAAGGATAAATATACCTTACATTTGAAAAAGAGAGACCCACCTTATATTGAGGGGCTGGAGCTGAAGAACGGCAGAATTCATTTAGTTTTTGAAGGTGATGATGATTATGAGGGAGACGAAGGATCACTGGATGAAAGTCATTACTCTGTTTCACAAAAACTAGCCAAGTTCTTCAACTTTGCTGCAGATGACCCATGTGTGTGA 3777 0.3924 MDFYVLYSFCFKFHKHVMVIDSFSDFLSILFFSDSDKSDKLIQHLVQTILKQMRNTPLNVAPYTVGVDDRVEELKKLLDVKSNDVRVLGLYGMGGVGKTTLAKSLFNNLVAHNFERRSFIPNIRSQVVSKHDGLVSLQTTIHSDLSGGKKDLIFNDADHGISSTKRILHENRVLLILDDVDNEEQLHFLLGERDWFYKGSRVVITTRDREVLTKSYVDVLYEVKELEFSPAMELFCYHAKPLEGFLDLSKQIVEITGGLPLALEVFGSFLFDKRTMREWKDAVEKMKQNISPSSLHDVLKVSFDALDEQEKCVFLDIACLFVQMEMKRDDVVDILNGCNFRGDIALTVLTARCLIKISGDGKVWMHDQIRDMGRQIVHSEGLSDPGQRSRLWDRDEILTVLNSMKGTRNVQGIVLDCVKRRMSTPRDRSADEITWESFRREPSFKSAIEYIKEKYKKYVLDREEKAKEVVLQTMHFESMVSLRLLQINYSRLEGHFRCLPQGLKWLQWKQCPLRYVPSSFCPSELSGMDLSESKIETVWGGRSNNKVAKNLMVLNLSNCHRLTETPDLTGYLSLKKIILENCSHLTRIHESLGSLCSLVHLNLSLCCDLVELPGDVSGLKNLEDLILSGCWKLEALPKDLSCMVSLRQLLLDGTTISELPESIFHLTKLEILNANACESLKRLPTCIGKLCSLQELSLNHTALEELPDSVGSLENLEMLSLVGCKSLSVIPNSIGKLISLNRLFLNISGIKELPASVGSLSFLRKLSLGDCTSLDNLPVSIEALASIAELQLDNTRITNLPDQMFVAMQMLEKLEMRKCQHLRFLPVSFGCLSALTSLDLHEASITELPESVGMLENLIRLRLDMCKQLQRLPDSFGNLKSLRWLLMKETALTDLPETFGMLTSLVMLDMERRPYLDGSGNNMPTGVIIPNKQEPNSEAILSSFCNLTSLEKLNAHGWEISGKIPDEFEKLSSLENLTFGHNNICSLPASMTGLSYLKKLLLPDCKELMFLPPLPSSLEELNLANCIAVQCMYDISNLKLLVELNLTNCEKVADIPGLEHLKSLRRLYMNGCVGCSLAVKRRFSKVLLKKLEILIMPGRRVPDWFTAEPVVYSKRRNRELKSIICSGVLSFNNIPENKREELQIVDVQGKVFNLTDRVFSTTFRLLGVPRTNEDHIFLRRFGVMSSLVFMLKDKYTLHLKKRDPPYIEGLELKNGRIHLVFEGDDDYEGDEGSLDESHYSVSQKLAKFFNFAADDPCV 1258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g0271 1258 SUPERFAMILY L domain-like 364 820 - -
Aed11g0271 1258 CDD AAA 65 208 - -
Aed11g0271 1258 Gene3D Ribonuclease Inhibitor 633 932 IPR032675 -
Aed11g0271 1258 Gene3D - 47 219 IPR027417 -
Aed11g0271 1258 Gene3D Ribonuclease Inhibitor 933 1148 IPR032675 -
Aed11g0271 1258 Pfam Leucine rich repeat 787 841 IPR001611 GO:0005515
Aed11g0271 1258 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 54 317 IPR027417 -
Aed11g0271 1258 Pfam NB-ARC domain 68 290 IPR002182 GO:0043531
Aed11g0271 1258 PANTHER TMV RESISTANCE PROTEIN N-LIKE 34 1211 - -
Aed11g0271 1258 Gene3D Ribonuclease Inhibitor 440 632 IPR032675 -
Aed11g0271 1258 Gene3D - 226 313 IPR042197 -
Aed11g0271 1258 PRINTS Disease resistance protein signature 256 270 - -
Aed11g0271 1258 PRINTS Disease resistance protein signature 167 181 - -
Aed11g0271 1258 PRINTS Disease resistance protein signature 711 727 - -
Aed11g0271 1258 PRINTS Disease resistance protein signature 87 102 - -
Aed11g0271 1258 SMART LRR_typ_2 832 855 IPR003591 -
Aed11g0271 1258 SMART LRR_typ_2 971 994 IPR003591 -
Aed11g0271 1258 SMART LRR_typ_2 643 666 IPR003591 -
Aed11g0271 1258 SMART LRR_typ_2 879 901 IPR003591 -
Aed11g0271 1258 SMART LRR_typ_2 690 713 IPR003591 -
Aed11g0271 1258 SMART LRR_typ_2 737 760 IPR003591 -
Aed11g0271 1258 SMART LRR_typ_2 784 807 IPR003591 -
Aed11g0271 1258 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 34 1211 IPR044974 GO:0006952
Aed11g0271 1258 SUPERFAMILY L domain-like 784 1101 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g0271 Aed-Chr11 2261308 2266758 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed11g0271 635 905 WRKY Transcription Factor Family AT4G12020 28.826 1.21e-11 67.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed11g0271 - - gmx:100784137 2019.59
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed11g0271 11 2261308 2266758 Aed11g0271 11 2261308 2266758 ECH
Aed7g1713 7 20541378 20550001 Aed11g0271 11 2261308 2266758 PCT