Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g0267 ATGTCTCGGACGTGCTCACAGTGCGGCAACAACGGCCACAACTCACGGACATGCACCGACGGTAGCGACGCCGCGTCCGGCGGCGTGTCTCCGAGGGAGAACGGCATCATGCTGTTCGGCGTGCGAGTCACCACCGAAGGAAACTCCTCCTCCTCCTCCTTCAGGAAGAGCGCTAGCATGAACAACCTCTCCCAGCTGTACGACGCCGACTCCAACGCCGTCGACGCCGCCGGCTACGCCTCCGACGACGTCGTCCACGCCTCCGGTCGCACGCGCGAGCGCAAGCGAGTGTTTGGGTTGATGAACGAAGGTGTTCCTTGGACTGAAGAAGAGCATAAGCTGTTCTTGTTAGGGTTACACAAAGTTGGAAAAGGAGATTGGAGAGGAATTTCTAGAAACTTCGTGAAAACTCGCACGCCAACTCAGGTAGCTAGTCATGCTCAGAAATACTTCCTCCGCCGCCACAACCAGAATCGCCGCCGCCGGAGATCTAGCCTCTTCGACATCACCACCGATACGGTGATGGAATCTTCTACTATAATGGAAGAGGAAGAATTTCCGCAAGAAACGGTGGCAGCGCATATCCCCGGCGCCGCTTATCCTCCGTCGCACTTCGGTGGTTTCCCCGGCGCGGGATTTCCGATGAGTCTATCTCCGGTTGTGTTGCCGGTGAGTGGTGAGAGACGGACCAAGCCGATCAGGCCGACGCCGATTTTGCCGGTGCCTCCGTCTTCGAAGATGGCTAATTTGAACTTGAAAGAGAAAGCTTCTCCGACAAATCTCATTATCGAACCTTTACCGTTGTCGCTGAATCTGCCGCCACCGCCACCGCCACAGTCGTCATCTCAGGATCGGTCGCCGGCGAGTAGTGGCCACTCGTCGCCGTCGTCTTCGTCGTCATCAGCGGCGGCTTTTCAGGCCATGTCTGCAGCGAAGTTCGGCGGCGGTGGGGATAGTATCATCAGCGTTGCTTGA 975 0.5744 MSRTCSQCGNNGHNSRTCTDGSDAASGGVSPRENGIMLFGVRVTTEGNSSSSSFRKSASMNNLSQLYDADSNAVDAAGYASDDVVHASGRTRERKRVFGLMNEGVPWTEEEHKLFLLGLHKVGKGDWRGISRNFVKTRTPTQVASHAQKYFLRRHNQNRRRRRSSLFDITTDTVMESSTIMEEEEFPQETVAAHIPGAAYPPSHFGGFPGAGFPMSLSPVVLPVSGERRTKPIRPTPILPVPPSSKMANLNLKEKASPTNLIIEPLPLSLNLPPPPPPQSSSQDRSPASSGHSSPSSSSSSAAAFQAMSAAKFGGGGDSIISVA 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g0267 324 ProSiteProfiles Myb-like domain profile. 106 151 IPR001005 -
Aed11g0267 324 SUPERFAMILY Homeodomain-like 103 154 IPR009057 -
Aed11g0267 324 Pfam Myb-like DNA-binding domain 106 151 IPR001005 -
Aed11g0267 324 SMART sant 103 153 IPR001005 -
Aed11g0267 324 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 103 153 IPR006447 GO:0003677
Aed11g0267 324 MobiDBLite consensus disorder prediction 1 24 - -
Aed11g0267 324 PANTHER TRANSCRIPTION FACTOR KUA1 1 321 - -
Aed11g0267 324 CDD SANT 106 151 IPR001005 -
Aed11g0267 324 MobiDBLite consensus disorder prediction 1 31 - -
Aed11g0267 324 ProSiteProfiles Zinc finger CCHC-type profile. 5 20 IPR001878 GO:0003676|GO:0008270
Aed11g0267 324 MobiDBLite consensus disorder prediction 283 304 - -
Aed11g0267 324 MobiDBLite consensus disorder prediction 268 282 - -
Aed11g0267 324 ProSiteProfiles SANT domain profile. 102 155 IPR017884 -
Aed11g0267 324 PANTHER TRANSCRIPTION FACTOR MYB1R1-LIKE 1 321 - -
Aed11g0267 324 MobiDBLite consensus disorder prediction 265 304 - -
Aed11g0267 324 Gene3D - 105 156 - -
Aed11g0267 324 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 106 155 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g0267 Aed-Chr11 2215330 2217721 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Aed11g0267 Myb_DNA-binding 1.2e-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed11g0267 - - gmx:778178 419.468
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed11g0267 11 2215330 2217721 Aed11g0267 11 2215330 2217721 ECH
Aed11g0267 11 2215330 2217721 Aed7g1710 7 20519586 20521815 PCT